RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ZNF442Q9H7R0 627 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 SEBOXQ9HB31 216 aaPredicted RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 MTCH1Q9NZJ7 389 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 TAAR3PQ9P1P4 343 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 NSG2Q9Y328 171 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 SLC22A20A6NK97 555 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 PRSS44E7EML9 344 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 MPPED1O15442 326 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 TLX3O43711 291 aaPredicted RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 PDCD6O75340 191 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 TRAPPC6AO75865 159 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 DEFA4P12838 97 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 SSR4P51571 173 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 RND3P61587 244 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM267Q0VDI3 215 aaPredicted RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 PDZD11Q5EBL8 140 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 SPINK14Q6IE38 97 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 UNQ6494/PRO21346Q6UXR6 183 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 AAED1Q7RTV5 226 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 TIPARPQ7Z3E1 657 aaKnown RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 RPS19BP1Q86WX3 136 aaKnown RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 SELENOHQ8IZQ5 122 aaKnown RBP6.14□□□□□ -1.43
COL28A1-202ENST00000430711 CYB561D1Q8N8Q1 229 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 AGBL5Q8NDL9 886 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 OR5C1Q8NGR4 320 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 Q8WTZ3 238 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 PSMF1Q92530 271 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 EXTL1Q92935 676 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 GPR35Q9HC97 309 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 MEMO1Q9Y316 297 aa6.14□□□□□ -1.43
COL28A1-202ENST00000430711 KIAA1324LA8MWY0 1029 aaPredicted RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TP53I11O14683 189 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ST8SIA3O43173 380 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 CA11O75493 328 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RHBDL1O75783 438 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 IGKV1-39P01597 117 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 IGKV1D-39P04432 117 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 CFIP05156 583 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 FABP1P07148 127 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SEC11BP0C7V7 166 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF806P0C7X5 589 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF14P17017 642 aaPredicted RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OTX2P32243 289 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 GUCA1AP43080 201 aaPredicted RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 HAAOP46952 286 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 FGF8P55075 233 aaPredicted RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 CARD18P57730 90 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 MLF1P58340 268 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 STARD6P59095 220 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RPS16P62249 146 aaKnown RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RAC1P63000 192 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ICAM4Q14773 271 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SMCO1Q147U7 214 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 PPA1Q15181 289 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OR8B8Q15620 311 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF726P1Q15940 193 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SPIN3Q5JUX0 258 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 PPP1R32Q7Z5V6 425 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OR2C3Q8N628 320 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM252Q8N6L7 170 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 LRTM2Q8N967 370 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OR1K1Q8NGR3 316 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OR2G3Q8NGZ4 309 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SPSB1Q96BD6 273 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RAB39BQ96DA2 213 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RSG1Q9BU20 258 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF700Q9H0M5 742 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 FAM212BQ9NTI7 297 aaPredicted RBP6.13□□□□□ -1.43
COL28A1-202ENST00000430711 OR1A1Q9P1Q5 309 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 MIOXQ9UGB7 285 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SLC7A11Q9UPY5 501 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 KPTNQ9Y664 436 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 POMT1Q9Y6A1 747 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 C1orf196B1AJZ1 125 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TRDCB7Z8K6 153 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 IFNL4K9M1U5 179 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 FGF5P12034 268 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 DTYMKP23919 212 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 LINC00205P59089 165 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 RAB5BP61020 215 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 NMSQ5H8A3 153 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 SPATA46Q5T0L3 261 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TCEAL6Q6IPX3 200 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 HAPLN4Q86UW8 402 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 UBALD2Q8IYN6 164 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TCEAL3Q969E4 200 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 MUCL1Q96DR8 90 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM222Q9H0R3 208 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 PLEKHA2Q9HB19 425 aa6.13□□□□□ -1.43
COL28A1-202ENST00000430711 H3BQ15 152 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 HS3ST1O14792 307 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 TOX3O15405 576 aaPredicted RBP6.12□□□□□ -1.43
COL28A1-202ENST00000430711 WISP2O76076 250 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 IGLV2-14P01704 120 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 APOC1P02654 83 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 MT-ND4LP03901 98 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 SRP19P09132 144 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms