RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ARPC4P59998 168 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 TOR2AQ5JU69 321 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 ACP7Q6ZNF0 438 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR8H3Q8N146 312 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 IGFBPL1Q8WX77 278 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 FOXRED1Q96CU9 486 aaPredicted RBP7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 RAB3CQ96E17 227 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR2A7Q96R45 310 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 SEC22CQ9BRL7 303 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 TMPRSS13Q9BYE2 586 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 PLEKHJ1Q9NW61 149 aa7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 KLF2Q9Y5W3 355 aaPredicted RBP7.96□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR2AT4A6NND4 320 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 H7C417 338 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 TMPRSS2O15393 492 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 IGHV4-39P01824 125 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SSTR2P30874 369 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 CD200P41217 278 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 COL10A1Q03692 680 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 LTC4SQ16873 150 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SUMF2Q8NBJ7 301 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 PECRQ9BY49 303 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 CST11Q9H112 138 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 TMEM106BQ9NUM4 274 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 ZNF701Q9NV72 531 aaPredicted RBP7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 MGAT4CQ9UBM8 478 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 MTFP1Q9UDX5 166 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 RAB22AQ9UL26 194 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 MAB21L2Q9Y586 359 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 A0A1B0GWJ7 208 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 TMEM82A0PJX8 343 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 FOXI3A8MTJ6 420 aaPredicted RBP7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SDCBPO00560 298 aaPredicted RBP7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 PHF1O43189 567 aaPredicted RBP7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SNAPC5O75971 98 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 DAOP14920 347 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 FGF12P61328 243 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 EFNB3Q15768 340 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 GRK1Q15835 563 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 ZNF260Q3ZCT1 412 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 Q6P435 159 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 ASCL4Q6XD76 172 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SLC36A1Q7Z2H8 476 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 CCL19Q99731 98 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 LPAR2Q9HBW0 351 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 GPN1Q9HCN4 374 aaPredicted RBP7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 CTSZQ9UBR2 303 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 ZDHHC8Q9ULC8 765 aa7.95□□□□□ -1.14
HMGCLL1-206ENST00000428842 SLC33A1O00400 549 aaPredicted RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 CREBL2O60519 120 aaPredicted RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 HAND1O96004 215 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 CYB5AP00167 134 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 CFDP00746 253 aaPredicted RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 LHBP01229 141 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 ANXA7P20073 488 aaKnown RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 GLIPR1P48060 266 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 RAP2BP61225 183 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TSPAN5P62079 268 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 C17orf107Q6ZR85 190 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 POC1AQ8NBT0 407 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 PXT1Q8NFP0 134 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 RFESDQ8TAC1 157 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 GPHA2Q96T91 129 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TLNRD1Q9H1K6 362 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 MS4A5Q9H3V2 200 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 FN3KRPQ9HA64 309 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TANC2Q9HCD6 1990 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 SRRM5B3KS81 715 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TMEM178BH3BS89 294 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 DEGS1O15121 323 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 PPIHO43447 177 aaKnown RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 RBBP9O75884 186 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 CSF1P09603 554 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 VSIG10L2P0DP72 767 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 M6PRP20645 277 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 CHATP28329 748 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 IL2RGP31785 369 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 FAUP35544 74 aaKnown RBP7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 ARFRP1Q13795 201 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 OPCMLQ14982 345 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TRAPPC6BQ86SZ2 158 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR4C16Q8NGL9 310 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 SHARPINQ9H0F6 387 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 TAS2R8Q9NYW2 309 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 ZNRD1Q9P1U0 126 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 RNF7Q9UBF6 113 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 ZNF69Q9UC07 566 aa7.94□□□□□ -1.14
HMGCLL1-206ENST00000428842 MFNGO00587 321 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 CD3DP04234 171 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 CXCL2P19875 107 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 C4BPBP20851 252 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 PAX6P26367 422 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 PRDX2P32119 198 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 EDDM3BP56851 147 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 SSBP1Q04837 148 aaKnown RBP7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 RBMS2Q15434 407 aaKnown RBP7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 PCGF3Q3KNV8 242 aa7.93□□□□□ -1.14
HMGCLL1-206ENST00000428842 DTX2Q86UW9 622 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms