RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CDC42P60953 191 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ZNF816Q0VGE8 651 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 CBX3Q13185 183 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 MADCAM1Q13477 382 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 KPNB1Q14974 876 aaKnown RBP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 SRSF7Q16629 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 HAGHQ16775 308 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ZNF829Q3KNS6 432 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 SPIN3Q5JUX0 258 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 SLC35D3Q5M8T2 416 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 Q6P435 159 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ACSM6Q6P461 480 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 HAPLN4Q86UW8 402 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 IZUMO1Q8IYV9 350 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ENTHD1Q8IYW4 607 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 TMEM104Q8NE00 496 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 OR4D6Q8NGJ1 314 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 OR13A1Q8NGR1 328 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 TEX47Q8TBZ9 253 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 NRG4Q8WWG1 115 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 UBE2E2Q96LR5 201 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 NSMCE2Q96MF7 247 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 KCTD7Q96MP8 289 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 OR5B12Q96R08 314 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 MNTQ99583 582 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 TXN2Q99757 166 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 GON7Q9BXV9 100 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 CHST5Q9GZS9 411 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ALX4Q9H161 411 aaPredicted RBP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 HMG20AQ9NP66 347 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 MRM2Q9UI43 246 aaKnown RBP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 OR52A1Q9UKL2 312 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSTF1-203ENST00000428552 R4GMQ9 66 aa6.2□□□□□ -1.42
CSTF1-203ENST00000428552 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 LINC00854A0A1B0GVQ3 168 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 A0A1W2PPE3 182 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 TCRBV5S2A0A599 114 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 ZNF736B4DX44 427 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-203ENST00000428552 NPIPB11E5RHQ5 1161 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 LOC110117498-PIK3R3F6TDL0 507 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 H3BSH0 61 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 SLC33A1O00400 549 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-203ENST00000428552 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 CLEC2LP0C7M8 214 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 ATP6V1B2P21281 511 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 POU3F4P49335 361 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 SLURP1P55000 103 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 CDK5Q00535 292 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 APOFQ13790 326 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 GINS1Q14691 196 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 BCL2L15Q5TBC7 163 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 LYPD6Q86Y78 171 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 Q8IYB0 196 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 ARPC1AQ92747 370 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 HRASLS5Q96KN8 279 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 S1PR3Q99500 378 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 FEVQ99581 238 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 OSBPL10Q9BXB5 764 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 COMMD4Q9H0A8 199 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 MOB1AQ9H8S9 216 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 RETNQ9HD89 108 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 EXOSC4Q9NPD3 245 aaKnown RBP6.19□□□□□ -1.42
CSTF1-203ENST00000428552 ING3Q9NXR8 418 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 CALYQ9NYX4 217 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 GSTK1Q9Y2Q3 226 aa6.19□□□□□ -1.42
CSTF1-203ENST00000428552 AMMECR1Q9Y4X0 333 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-203ENST00000428552 FAM90A10PA6NDY2 464 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 NCBP2LA6PVI3 153 aaKnown RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 G3V318 75 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 H3BN98 237 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 HSD17B6O14756 317 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 GMNNO75496 209 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 REG1BP48304 166 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 GNG10P50151 68 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 F2RL1P55085 397 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 RPS7P62081 194 aaKnown RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 CBX1P83916 185 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 ATXN7L3Q14CW9 347 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 CDK5R1Q15078 307 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 ODF4Q2M2E3 257 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 TMEM236Q5W0B7 351 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 ZNF322Q6U7Q0 402 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 SSX6Q7RTT6 188 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 TMEM179BQ7Z7N9 219 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 OR10G2Q8NGC3 310 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 HAVCR2Q8TDQ0 301 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 ASB17Q8WXJ9 295 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 ST6GALNAC6Q969X2 333 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 RNF166Q96A37 237 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 BORCS8Q96FH0 119 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 NABP2Q9BQ15 211 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 THAP7Q9BT49 309 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-203ENST00000428552 TEX12Q9BXU0 123 aa6.18□□□□□ -1.42
CSTF1-203ENST00000428552 IDI2-AS1Q9NZ38 188 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms