RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GPR137BO60478 399 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 IL1AP01583 271 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 CCL3L1P16619 93 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 SRMP19623 302 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 HTR1DP28221 377 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 RAG2P55895 527 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 TAF9Q16594 264 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 ACSM3Q53FZ2 586 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 KRBOX4Q5JUW0 171 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 PRR31Q5SQ13 230 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 RUSC1-AS1Q66K80 236 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 OLFML2AQ68BL7 652 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF367Q7RTV3 350 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 OR2W3Q7Z3T1 314 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 THNSL2Q86YJ6 484 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 Q8N2B8 174 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 SVOPQ8N4V2 548 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 LINC00311Q8N616 119 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 OR5D18Q8NGL1 313 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 OR6M1Q8NGM8 313 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 COQ2Q96H96 371 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 Q96M66 194 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 SPACA5Q96QH8 159 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 ELL3Q9HB65 397 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-203ENST00000428014 DPM3Q9P2X0 92 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 IL36RNQ9UBH0 155 aa7.41□□□□□ -1.22
SMC1A-203ENST00000428014 AMMECR1Q9Y4X0 333 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-203ENST00000428014 IGHV3OR16-10A0A075B7F0 116 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 TRAV1-2A0A0B4J238 106 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 TMEM30CPA0ZSE6 113 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 H3BSH0 61 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 FUT3P21217 361 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 BRS3P32247 399 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 OR3A4PP47883 348 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 PRRX1P54821 245 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 HABP2Q14520 560 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MED22Q15528 200 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 HLA-DRB5Q30154 266 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 HSD17B12Q53GQ0 312 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 PAN3Q58A45 887 aaKnown RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 DHRS7BQ6IAN0 325 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 OR4M1Q8NGD0 313 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 OR4P4Q8NGL7 312 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 OR9G1Q8NH87 305 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 KCNG3Q8TAE7 436 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 PIFOQ8TCI5 191 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 RFT1Q96AA3 541 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 AKR1E2Q96JD6 320 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 OR5M11Q96RB7 305 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MGLLQ99685 303 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 SSX3Q99909 188 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 CENPOQ9BU64 300 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 DPCDQ9BVM2 203 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 TM2D1Q9BX74 207 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 PPA2Q9H2U2 334 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 GHITMQ9H3K2 345 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 RIMS4Q9H426 269 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MGAT4AQ9UM21 535 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 TCF19Q9Y242 345 aa7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MRPS28Q9Y2Q9 187 aaKnown RBP7.4□□□□□ -1.22
SMC1A-203ENST00000428014 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 LEUTXA8MZ59 168 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 MCRIP1C9JLW8 97 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 M0QZK8 103 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 SIRPB1O00241 398 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 F2RL2O00254 374 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 OR7C1O76099 320 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-203ENST00000428014 HTR3BO95264 441 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 DIRAS3O95661 229 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 TFF1P04155 84 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 CDK2P24941 298 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 DUSP1P28562 367 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 FGF9P31371 208 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-203ENST00000428014 GLIPR1P48060 266 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF137PP52743 207 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 GP2P55259 537 aaKnown RBP7.39□□□□□ -1.23
SMC1A-203ENST00000428014 PROK1P58294 105 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 AESQ08117 197 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 KLRD1Q13241 179 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 EDDM3AQ14507 147 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 C17orf58Q2M2W7 97 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 C6orf183Q5T699 404 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 UBE2UQ5VVX9 321 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 GLIPR1L1Q6UWM5 242 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF497Q6ZNH5 498 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 RNF144BQ7Z419 303 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 LRRTM1Q86UE6 522 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 SATL1Q86VE3 508 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 ABHD12Q8N2K0 398 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 PNKDQ8N490 385 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 FAM89BQ8N5H3 189 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 SUMF2Q8NBJ7 301 aa7.39□□□□□ -1.23
SMC1A-203ENST00000428014 LINC01006Q8NI28 216 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms