RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NFYBP25208 207 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MAPK3P27361 379 aaPredicted RBP7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 HTR1DP28221 377 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RAB13P51153 203 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 PROK1P58294 105 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 BDH1Q02338 343 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RBM39Q14498 530 aaKnown RBP7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 SPHARQ15513 63 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MED22Q15528 200 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 C17orf58Q2M2W7 97 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 NHLRC3Q5JS37 347 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ATAD3CQ5T2N8 411 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MINOS1Q5TGZ0 78 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RSBN1Q5VWQ0 802 aaPredicted RBP7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 OR52W1Q6IF63 320 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 GLIPR1L1Q6UWM5 242 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ABHD12Q8N2K0 398 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 NKAIN3Q8N8D7 197 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 SUMF2Q8NBJ7 301 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 Q8NFD4 153 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 OR4P4Q8NGL7 312 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 PLPPR1Q8TBJ4 325 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF596Q8TC21 504 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MRGPRDQ8TDS7 321 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 NEK7Q8TDX7 302 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CORO2AQ92828 525 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MALSU1Q96EH3 234 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CDCA4Q9BXL8 241 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ANKRD60Q9BZ19 345 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 NPFFR1Q9GZQ6 430 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 C16orf95Q9H693 158 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF286AQ9HBT8 521 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CALYQ9NYX4 217 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 FOXJ3Q9UPW0 622 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MINOS1-NBL1R4GNA1 71 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TRAV39A0A0B4J263 110 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 KBTBD11-OT1A0A1B0GTJ5 212 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TMEM30CPA0ZSE6 113 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF729A6NN14 1252 aaPredicted RBP7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF780AO75290 641 aaPredicted RBP7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 IL1AP01583 271 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 IGHV3-7P01780 117 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CD1AP06126 327 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 SSTR5P35346 364 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 KCNJ3P48549 501 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 HSPA13P48723 471 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 SLC35A2P78381 396 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 LTC4SQ16873 150 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RBM48Q5RL73 367 aaKnown RBP7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 UTF1Q5T230 341 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 FAM27D1Q5T7N8 215 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RNLSQ5VYX0 342 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 SLC35E4Q6ICL7 350 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 LINC00596Q86U02 117 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 THRSPQ92748 146 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 UFD1Q92890 307 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 FAM46BQ96A09 425 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CNBD2Q96M20 576 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CITED1Q99966 193 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 BARHL1Q9BZE3 327 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CCDC90BQ9GZT6 254 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RANBP3Q9H6Z4 567 aaPredicted RBP7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF696Q9H7X3 374 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 IFT22Q9H7X7 185 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 DPM3Q9P2X0 92 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 LSM2Q9Y333 95 aaKnown RBP7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TPRKBQ9Y3C4 175 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MGAM2Q2M2H8 2515 aa7.43□□□□□ -1.22
RFX3-AS1-202ENST00000427722 MEGF11A6BM72 1044 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 A6NDX4 124 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TOR1AO14656 332 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RGS10O43665 173 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 HSMCR30P0CW71 290 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CD34P28906 385 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 GNG10P50151 68 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 GPR50Q13585 617 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 GPR176Q14439 515 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 IRF3Q14653 427 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 HLA-DRB5Q30154 266 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ACSM3Q53FZ2 586 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 LIPKQ5VXJ0 399 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 CCBE1Q6UXH8 406 aaPredicted RBP7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RTN4RL2Q86UN3 420 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 ZNF565Q8N9K5 539 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 OR2T6Q8NHC8 308 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 RFESDQ8TAC1 157 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 LEAP2Q969E1 77 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TMEM203Q969S6 136 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 BANF2Q9H503 90 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 TCF7L1Q9HCS4 588 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 PCDHB16Q9NRJ7 776 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 IDI2-AS1Q9NZ38 188 aa7.42□□□□□ -1.22
RFX3-AS1-202ENST00000427722 A0A087X0M5 115 aa7.41□□□□□ -1.22
RFX3-AS1-202ENST00000427722 A0A1B0GX30 115 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms