RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZNF479Q96JC4 524 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 NIPSNAP1Q9BPW8 284 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 SFXN3Q9BWM7 321 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ZDHHC11Q9H8X9 412 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 TMEM160Q9NX00 188 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 SDK1Q7Z5N4 2213 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR2A4O95047 310 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 UCP2P55851 309 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CLEC12BQ2HXU8 276 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 LRRC75BQ2VPJ9 315 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ZNF528Q3MIS6 628 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 AQP10Q96PS8 301 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR2A7Q96R45 310 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 RPP25Q9BUL9 199 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 PARD6GQ9BYG4 376 aaPredicted RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 ANKRD60Q9BZ19 345 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 LOC102723996A0A087X1L8 192 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 IGKV3OR2-268A0A0C4DH90 116 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 hCG_38984A0A1B0GV85 526 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 LINC00587B1AMM8 73 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 UPK1AO00322 258 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 PSCAO43653 123 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 EDIL3O43854 480 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CD33P20138 364 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 RPL31P62899 125 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 UBE2L3P68036 154 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 BAK1Q16611 211 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 FBXW9Q5XUX1 488 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OLIG3Q7RTU3 272 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 SLC16A13Q7RTY0 426 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR1L8Q8NGR8 309 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR1N2Q8NGR9 330 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 MARC2Q969Z3 335 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 LRP12Q9Y561 859 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 TMEM56-RWDD3S4R434 201 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 U3KQ87 197 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CHD2O14647 1828 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 A0A0A6YYD5 115 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 ZC3H12DA2A288 527 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 H0Y980 276 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 NKX2-8O15522 239 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 GLI4P10075 376 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 RPS4Y1P22090 263 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 KRTDAPP60985 99 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR52B4Q8NGK2 314 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR2G2Q8NGZ5 317 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR6X1Q8NH79 312 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 NEU4Q8WWR8 484 aaPredicted RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 RTN4IP1Q8WWV3 396 aaPredicted RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 METTL1Q9UBP6 276 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 WASHC3Q9Y3C0 194 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 USP54Q70EL1 1684 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 IGHV3OR16-10A0A075B7F0 116 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 ALDOCP09972 364 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 PGA3P0DJD8 388 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 P2RY6Q15077 328 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 ZNF841Q6ZN19 808 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 TMUB2Q71RG4 321 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR10W1Q8NGF6 305 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 ADAMTS17Q8TE56 1095 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 GPR35Q9HC97 309 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 BET1LQ9NYM9 111 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 PRSS50Q9UI38 385 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 MRPS18BQ9Y676 258 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 A0A1W2PNV4 684 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 MEX3AA1L020 520 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 ITGB1BP1O14713 200 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 LILRA1O75019 489 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 DKK1O94907 266 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 P01737 135 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 APELAP0DMC3 54 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 SULT1A1P50225 295 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 CIRBPQ14011 172 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 FAM222BQ8WU58 562 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 TCRBV4S1A1TA0A5B7 111 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 DHRS7CA6NNS2 312 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 UMAD1C9J7I0 102 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 TMEM238C9JI98 176 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 H3BMH7 237 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 K7N7A8 449 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 SPINT1O43278 529 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 HOXA3O43365 443 aaPredicted RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 KLF7O75840 302 aaPredicted RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 THY1P04216 161 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR5AC1P0C628 307 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 DSCR9P59020 149 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 RANP62826 216 aaKnown RBP5.04□□□□□ -1.6
HERC4-206ENST00000427635 COL10A1Q03692 680 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 IRF3Q14653 427 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 PARP16Q8N5Y8 322 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 OR4X1Q8NH49 305 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 GUCD1Q96NT3 240 aa5.04□□□□□ -1.6
HERC4-206ENST00000427635 C1orf43Q9BWL3 253 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms