RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 CRIM1Q9NZV1 1036 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 C9orf172C9J069 976 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 PRSS44E7EML9 344 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 PROB1E7EW31 1015 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 ETV2O00321 342 aaPredicted RBP11.53□□□□□ -0.56
USP42-203ENST00000426246 S100PP25815 95 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP42-203ENST00000426246 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 TRAPPC2LQ9UL33 140 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 TIMM10BQ9Y5J6 103 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 PCNX2A6NKB5 2137 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 CBR3O75828 277 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 IDH3GP51553 393 aaPredicted RBP11.53□□□□□ -0.56
USP42-203ENST00000426246 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
USP42-203ENST00000426246 RAB1AP62820 205 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 FAM53AQ6NSI3 398 aaPredicted RBP11.53□□□□□ -0.56
USP42-203ENST00000426246 CPT1CQ8TCG5 803 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 Q96M66 194 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 PRO1933Q9H354 126 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 MIOXQ9UGB7 285 aa11.53□□□□□ -0.56
USP42-203ENST00000426246 SLC34A2O95436 690 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 KRASP01116 189 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 APOC1P02654 83 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 FUT3P21217 361 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 PLP2Q04941 152 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 PRDX4Q13162 271 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 DCAF12Q5T6F0 453 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 IL34Q6ZMJ4 242 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 HINT2Q9BX68 163 aa11.52□□□□□ -0.56
USP42-203ENST00000426246 MED12LQ86YW9 2145 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 IGLV3-32A0A0A0MS00 114 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 IGHV3-43A0A0B4J1X8 118 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
USP42-203ENST00000426246 IGHV3-43DP0DP04 118 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 S100A2P29034 98 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 ACER2Q5QJU3 275 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 ABHD17BQ5VST6 288 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CNEP1R1Q8N9A8 125 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CPEB3Q8NE35 698 aaKnown RBP11.52□□□□□ -0.57
USP42-203ENST00000426246 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.57
USP42-203ENST00000426246 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 STARD10Q9Y365 291 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 CHATP28329 748 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 MAGEA5P43359 124 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 SULT1A2P50226 295 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 LIAT1Q6ZQX7 453 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 EIF4E3Q8N5X7 224 aaKnown RBP11.52□□□□□ -0.57
USP42-203ENST00000426246 ZIC4Q8N9L1 334 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 KPTNQ9Y664 436 aa11.52□□□□□ -0.57
USP42-203ENST00000426246 PINLYPA6NC86 204 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 PDCD6O75340 191 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 FABP1P07148 127 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 ACAA1P09110 424 aaPredicted RBP11.51□□□□□ -0.57
USP42-203ENST00000426246 ARG2P78540 354 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 TGFBR3Q03167 851 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 ZNF816Q0VGE8 651 aaPredicted RBP11.51□□□□□ -0.57
USP42-203ENST00000426246 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 CRYM-AS1A6NIL9 109 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 MPPED1O15442 326 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 LILRA1O75019 489 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 IFNA5P01569 189 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 RAC1P63000 192 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 WFIKKN1Q96NZ8 548 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 PFDN5Q99471 154 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 ZNF552Q9H707 407 aaPredicted RBP11.51□□□□□ -0.57
USP42-203ENST00000426246 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 FOXJ2Q9P0K8 574 aa11.51□□□□□ -0.57
USP42-203ENST00000426246 A0A1W2PNV4 684 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 FGF16O43320 207 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 CLDN1O95832 211 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 FAM3AP98173 230 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 EDDM3AQ14507 147 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 OR2H1Q9GZK4 316 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 TMEM38BQ9NVV0 291 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 IGSF23A1L1A6 192 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 SCAF4O95104 1147 aaKnown RBP11.5□□□□□ -0.57
USP42-203ENST00000426246 SYNGR4O95473 234 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 PRF1P14222 555 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 RPS2P15880 293 aaKnown RBP11.5□□□□□ -0.57
USP42-203ENST00000426246 LINC00205P59089 165 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 Q0VFX4 171 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
USP42-203ENST00000426246 ADIRFQ15847 76 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms