RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LHX4Q969G2 390 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 SLC25A46Q96AG3 418 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 SULT4A1Q9BR01 284 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 FAAP24Q9BTP7 215 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 OR6C3Q9NZP0 311 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 NUP50Q9UKX7 468 aa20.06■□□□□ 0.8
VEGFA-209ENST00000425836 TMEM127O75204 238 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 MT-ND4P03905 459 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 TMEM50BP56557 158 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 OR56B1Q8NGI3 324 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 OR13A1Q8NGR1 328 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 DYRK2Q92630 601 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 TAS2R3Q9NYW6 316 aa20.05■□□□□ 0.8
VEGFA-209ENST00000425836 hCG_1809904A0A1W2PP81 198 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 A0A1W2PPE2 198 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 A0A1W2PR64 198 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 A0A1W2PRV1 198 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 CGB3P0DN86 165 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 CGB7P0DN87 165 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 ZNF565Q8N9K5 539 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 OR5H6Q8NGV6 325 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 NDNFQ8TB73 568 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 PLEKHJ1Q9NW61 149 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 TRAV39A0A0B4J263 110 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 RNASEK-C17orf49H0YIS7 233 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 RBP4P02753 201 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 HOXB4P17483 251 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-209ENST00000425836 TMBIM6P55061 237 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 SCAND1P57086 179 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 FAM189A2Q15884 450 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 MOGAT2Q3SYC2 334 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 GPR157Q5UAW9 335 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 PDZD9Q8IXQ8 264 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 GAPTQ8N292 157 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 HSF4Q9ULV5 492 aa20.04■□□□□ 0.8
VEGFA-209ENST00000425836 CA11O75493 328 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 EPHA1P21709 976 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 GLP1RP43220 463 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 KLRD1Q13241 179 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 PLAC9Q5JTB6 97 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 HCP5Q6MZN7 132 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 ZNF782Q6ZMW2 699 aaPredicted RBP20.03■□□□□ 0.8
VEGFA-209ENST00000425836 Q6ZTK2 550 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 USP43Q70EL4 1123 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 MRGPRDQ8TDS7 321 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 RAB2BQ8WUD1 216 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 CCDC107Q8WV48 283 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 ARHGAP5-AS1Q96IT6 56 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 DCSTAMPQ9H295 470 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 GAL3ST2Q9H3Q3 398 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 ABRACLQ9P1F3 81 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 ZNF69Q9UC07 566 aa20.03■□□□□ 0.8
VEGFA-209ENST00000425836 METTL21EPA6NDL7 271 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 RAB27BO00194 218 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 MMP23AO75900 390 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 IGHV1-8P0DP01 117 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 C17orf58Q2M2W7 97 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 NCR3LG1Q68D85 454 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 ATG5Q9H1Y0 275 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 ETV7Q9Y603 341 aa20.02■□□□□ 0.8
VEGFA-209ENST00000425836 IGHV1-69DA0A0B4J2H0 117 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 KBTBD11-OT1A0A1B0GTJ5 212 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 ZNF729A6NN14 1252 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-209ENST00000425836 IGHV1-69P01742 117 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 BRD3OSQ6XYD6 125 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 OR10R2Q8NGX6 335 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 OR4K15Q8NH41 348 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 C22orf15Q8WYQ4 148 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 BCL7BQ9BQE9 202 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 PECRQ9BY49 303 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 SPATA2Q9UM82 520 aa20.01■□□□□ 0.79
VEGFA-209ENST00000425836 CLPXO76031 633 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 SPCS2Q15005 226 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 PRAMEF5Q5TYX0 476 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 RUSC1-AS1Q66K80 236 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 HEPN1Q6WQI6 88 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 BCL6BQ8N143 479 aaPredicted RBP20■□□□□ 0.79
VEGFA-209ENST00000425836 RAB3CQ96E17 227 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 HEXA-AS1Q9H8Q6 139 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 RHBDL2Q9NX52 303 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 CALYQ9NYX4 217 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 TRAPPC2LQ9UL33 140 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 SOX21Q9Y651 276 aaPredicted RBP20■□□□□ 0.79
VEGFA-209ENST00000425836 CEPT1Q9Y6K0 416 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 GZMHP20718 246 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 OMGP23515 440 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 CDK2P24941 298 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 RORCP51449 518 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 UBE2E1P51965 193 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 BPIFB3P59826 476 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 MRPL30Q8TCC3 161 aaKnown RBP20■□□□□ 0.79
VEGFA-209ENST00000425836 SLC25A38Q96DW6 304 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 MS4A7Q9GZW8 240 aaPredicted RBP20■□□□□ 0.79
VEGFA-209ENST00000425836 LINC00574Q9H8X3 128 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 AK3Q9UIJ7 227 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 KCNK7Q9Y2U2 307 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 SESN1Q9Y6P5 492 aa20■□□□□ 0.79
VEGFA-209ENST00000425836 GDNFP39905 211 aa19.99■□□□□ 0.79
VEGFA-209ENST00000425836 GUCA2AQ02747 115 aa19.99■□□□□ 0.79
VEGFA-209ENST00000425836 C9orf139Q6ZV77 190 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms