RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SNRPGP15A8MWD9 76 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 C9JQL5 133 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 C9JVG2 144 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 RNASEK-C17orf49H0YIS7 233 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MANBAO00462 879 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CXCR6O00574 342 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MFNGO00587 321 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GNGT2O14610 69 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 PRRG1O14668 218 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 EEF1E1O43324 174 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 KDELR3O43731 214 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 RAMP3O60896 148 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CLDN11O75508 207 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ADAP1O75689 374 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SCELO95171 688 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 FARS2O95363 451 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 HPRT1P00492 218 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GCGP01275 180 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 C1QCP02747 245 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 EIF4EP06730 217 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CD14P08571 375 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR4A8P0C604 315 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR5AC1P0C628 307 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF735P0CB33 412 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 FABP4P15090 132 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 PSMA1P25786 263 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 HMGB2P26583 209 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 FGF9P31371 208 aaPredicted RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CTRLP40313 264 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 AKR1C3P42330 323 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GABRA4P48169 554 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 INPP1P49441 399 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TTPAP49638 278 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TNFSF10P50591 281 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GZMMP51124 257 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 RAB7AP51149 207 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CEBPGP53567 150 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CLDN12P56749 244 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CLDN18P56856 261 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 DAOAP59103 153 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CDC42P60953 191 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 DYNLT1P63172 113 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 RPL19P84098 196 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OC90Q02509 493 aaPredicted RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SNTB2Q13425 540 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR5I1Q13606 314 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GINS1Q14691 196 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 KIR2DS1Q14954 304 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 NDUFA9Q16795 377 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SMIM21Q3B7S5 101 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 BSXQ3C1V8 233 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CCSMST1Q4G0I0 132 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 HIKESHIQ53FT3 197 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SPANXN3Q5MJ09 141 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 PIP5KL1Q5T9C9 394 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TSPO2Q5TGU0 170 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR10K2Q6IF99 312 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CD200R1LQ6Q8B3 271 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM270Q6UE05 265 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 Q6ZPB1 254 aaPredicted RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SLC36A1Q7Z2H8 476 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TAF8Q7Z7C8 310 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 LYG2Q86SG7 212 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SCD5Q86SK9 330 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OAFQ86UD1 273 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 LRP11Q86VZ4 500 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CALHM3Q86XJ0 350 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SIAH3Q8IW03 269 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SLC30A8Q8IWU4 369 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 NRMQ8IXM6 262 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF679Q8IYX0 411 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 FAM24BQ8N5W8 94 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 B3GNT7Q8NFL0 401 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR11G2Q8NGC1 345 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR4K5Q8NGD3 323 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR4D5Q8NGN0 318 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR9Q1Q8NGQ5 310 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR13C2Q8NGS9 318 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR52P1PQ8NH57 321 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR52J3Q8NH60 311 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR4C6Q8NH72 309 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF596Q8TC21 504 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 HAVCR2Q8TDQ0 301 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CXorf40AQ8TE69 158 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 THEM6Q8WUY1 208 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 CACNG8Q8WXS5 425 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MRPS31Q92665 395 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 RDH5Q92781 318 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ISOC2Q96AB3 205 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MUCL1Q96DR8 90 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 DTD2Q96FN9 168 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SLC41A3Q96GZ6 507 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 AKR1E2Q96JD6 320 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF75AQ96N20 296 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 IP6K3Q96PC2 410 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR2M4Q96R27 311 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 PHB2Q99623 299 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GPR22Q99680 433 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 NIPSNAP1Q9BPW8 284 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms