RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CHST4Q8NCG5 386 aa10.44□□□□□ -0.74
VRK3-203ENST00000424804 THRSPQ92748 146 aa10.44□□□□□ -0.74
VRK3-203ENST00000424804 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
VRK3-203ENST00000424804 PPIL3Q9H2H8 161 aaKnown RBP10.44□□□□□ -0.74
VRK3-203ENST00000424804 Q9H521 79 aa10.44□□□□□ -0.74
VRK3-203ENST00000424804 SEBOXQ9HB31 216 aaPredicted RBP10.44□□□□□ -0.74
VRK3-203ENST00000424804 ZNF581Q9P0T4 197 aa10.44□□□□□ -0.74
VRK3-203ENST00000424804 KMT2CQ8NEZ4 4911 aaKnown RBP10.44□□□□□ -0.74
VRK3-203ENST00000424804 MEIKINA0A087WXM9 373 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 ODAMA1E959 279 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 GEMIN2O14893 280 aaKnown RBP10.43□□□□□ -0.74
VRK3-203ENST00000424804 GPX5O75715 221 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 CRTAPO75718 401 aaPredicted RBP10.43□□□□□ -0.74
VRK3-203ENST00000424804 CD28P10747 220 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 LMO1P25800 156 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 ERP29P30040 261 aaKnown RBP10.43□□□□□ -0.74
VRK3-203ENST00000424804 GLP1RP43220 463 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 RPS25P62851 125 aaKnown RBP10.43□□□□□ -0.74
VRK3-203ENST00000424804 HSD17B12Q53GQ0 312 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 ZNF626Q68DY1 528 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 OR11H6Q8NGC7 330 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 OR51T1Q8NGJ9 327 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 OR4C13Q8NGP0 309 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 COQ2Q96H96 371 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 GAL3ST2Q9H3Q3 398 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 BANF2Q9H503 90 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 PCDHB16Q9NRJ7 776 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 KIF25Q9UIL4 384 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 TCF19Q9Y242 345 aa10.43□□□□□ -0.74
VRK3-203ENST00000424804 TRAV24A0A0B4J272 114 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 ZNF780AO75290 641 aaPredicted RBP10.42□□□□□ -0.74
VRK3-203ENST00000424804 MMP23AO75900 390 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 GTF2F2P13984 249 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 CDK2P24941 298 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 NFYBP25208 207 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 RBM11P57052 281 aaKnown RBP10.42□□□□□ -0.74
VRK3-203ENST00000424804 GPR176Q14439 515 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 FAM189A2Q15884 450 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 LTC4SQ16873 150 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 BAIAP2L2Q6UXY1 529 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 ASCL4Q6XD76 172 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 LIAT1Q6ZQX7 453 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 NKAIN3Q8N8D7 197 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 SUMF2Q8NBJ7 301 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 OR4D6Q8NGJ1 314 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 OR2T6Q8NHC8 308 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 NDNFQ8TB73 568 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 PLPPR1Q8TBJ4 325 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 FAM46BQ96A09 425 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 MGLLQ99685 303 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 DPCDQ9BVM2 203 aaPredicted RBP10.42□□□□□ -0.74
VRK3-203ENST00000424804 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 SELENOIQ9C0D9 397 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 MMP28Q9H239 520 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 RAB18Q9NP72 206 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 IL36GQ9NZH8 169 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 UBE2J1Q9Y385 318 aaPredicted RBP10.42□□□□□ -0.74
VRK3-203ENST00000424804 SESN1Q9Y6P5 492 aa10.42□□□□□ -0.74
VRK3-203ENST00000424804 TRAV39A0A0B4J263 110 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 FAM90A22PA8MWA6 464 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 RBP4P02753 201 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 VSIG10L2P0DP72 767 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 DYNLT3P51808 116 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 BLCAPP62952 87 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 MLLT11Q13015 90 aaPredicted RBP10.41□□□□□ -0.74
VRK3-203ENST00000424804 GPR50Q13585 617 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 SSX2Q16385 188 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 OXLD1Q5BKU9 147 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 GLT8D1Q68CQ7 371 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 MRGPRDQ8TDS7 321 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 MALSU1Q96EH3 234 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 OCSTAMPQ9BR26 566 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 NPFFR1Q9GZQ6 430 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 TMEM133Q9H2Q1 129 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 TBL2Q9Y4P3 447 aaKnown RBP10.41□□□□□ -0.74
VRK3-203ENST00000424804 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
VRK3-203ENST00000424804 IGHV2-26A0A0B4J1V2 119 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 CSN2P05814 226 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 MGMTP16455 207 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 SRMP19623 302 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 GDNFP39905 211 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 RBM39Q14498 530 aaKnown RBP10.4□□□□□ -0.74
VRK3-203ENST00000424804 UNQ9370/PRO34162Q6UXP9 181 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 ZNF367Q7RTV3 350 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 OR13A1Q8NGR1 328 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 CCDC107Q8WV48 283 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 CITED2Q99967 270 aaPredicted RBP10.4□□□□□ -0.74
VRK3-203ENST00000424804 CLEC7AQ9BXN2 247 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 ABCB10Q9NRK6 738 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 TAS2R3Q9NYW6 316 aa10.4□□□□□ -0.74
VRK3-203ENST00000424804 COL7A1Q02388 2944 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
VRK3-203ENST00000424804 TOR1AO14656 332 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 MPIG6BO95866 241 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 CPEP16870 476 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 GP2P55259 537 aaKnown RBP10.39□□□□□ -0.75
VRK3-203ENST00000424804 TPBGQ13641 420 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms