RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 COL9A2Q14055 689 aaPredicted RBP8.58□□□□□ -1.04
USP54-205ENST00000424265 CLEC12BQ2HXU8 276 aa8.58□□□□□ -1.04
USP54-205ENST00000424265 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
USP54-205ENST00000424265 CENPMQ9NSP4 180 aa8.58□□□□□ -1.04
USP54-205ENST00000424265 FBLL1A6NHQ2 334 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 OMGP23515 440 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 CEACAM3P40198 252 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 SPOCK1Q08629 439 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 CD300LDQ6UXZ3 194 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 MYLKQ15746 1914 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 GPR137BO60478 399 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 MEOX1P50221 254 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 ASCL1P50553 236 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 PPP1R1AQ13522 171 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 OR4C3Q8NH37 302 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 SPTSSAQ969W0 71 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 ULBP2Q9BZM5 246 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 PKIBQ9C010 78 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 TRAPPC1Q9Y5R8 145 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 TRGV5A0A0B4J1U4 118 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 PTGER4P35408 488 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 RPL27P61353 136 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 SSBP1Q04837 148 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 SGPP2Q8IWX5 399 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 TMEM99Q8N816 258 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 SLC17A5Q9NRA2 495 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 LIFP15018 202 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 ZNF20P17024 532 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 PPP1R32Q7Z5V6 425 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 STPG4Q8N801 248 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 BORCS7Q96B45 105 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 SRA1Q9HD15 236 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 ANKRD10Q9NXR5 420 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 NEUROG3Q9Y4Z2 214 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 TRAV27A0A087WT01 109 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 GAGE12BA1L429 117 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 DUS4LO95620 317 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 CSTBP04080 98 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 ZBTB25P24278 435 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 RPS20P60866 119 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 MGAT2Q10469 447 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 FOXF1Q12946 379 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 RNPS1Q15287 305 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 ZNF770Q6IQ21 691 aaPredicted RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 CLEC18BQ6UXF7 455 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 MRPL21Q7Z2W9 205 aaKnown RBP8.57□□□□□ -1.04
USP54-205ENST00000424265 OR4S2Q8NH73 311 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 TNFRSF13CQ96RJ3 184 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 OR51I2Q9H344 312 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 GPR35Q9HC97 309 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 Q9N2K0 584 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 CDC42EP3Q9UKI2 254 aa8.57□□□□□ -1.04
USP54-205ENST00000424265 NCOR1O75376 2440 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 C10orf142B7Z368 130 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 E9PQ18 207 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 UCP1P25874 307 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 PIGPP57054 158 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 TCF15Q12870 199 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 MALLQ13021 153 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 ZNF485Q8NCK3 441 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 CSNK2A3Q8NEV1 391 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 ZNF106Q9H2Y7 1883 aaKnown RBP8.56□□□□□ -1.04
USP54-205ENST00000424265 LY6G6EA0A0G2JKS1 128 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 DIRC3C9JPN6 131 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 G3V3Y1 287 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
USP54-205ENST00000424265 TIAF1O95411 115 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 NPY4RP50391 375 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 DUSP2Q05923 314 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 LTC4SQ16873 150 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 TMEM177Q53S58 311 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 LCN10Q6JVE6 187 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 MOB1BQ7L9L4 216 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 BIVMQ86UB2 503 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 CYB561A3Q8NBI2 242 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 GPR32P1Q8NGA4 272 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 C11orf40Q8WZ69 217 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 SPXQ9BT56 116 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 FBXL17Q9UF56 701 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 U3KQA8 63 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 FOXL2P58012 376 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 SLC35F2Q8IXU6 374 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 C17orf78Q8N4C9 275 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 ZSCAN4Q8NAM6 433 aaPredicted RBP8.56□□□□□ -1.04
USP54-205ENST00000424265 TMEM229BQ8NBD8 167 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 AICDAQ9GZX7 198 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 RALYQ9UKM9 306 aaKnown RBP8.56□□□□□ -1.04
USP54-205ENST00000424265 RBFOX2O43251 390 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP54-205ENST00000424265 SLC6A9P48067 706 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 GAS1P54826 345 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 CARD17Q5XLA6 110 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 YRDCQ86U90 279 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms