RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 A0A1W2PRV1 198 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 TMEM30CPA0ZSE6 113 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 CCDC160A6NGH7 325 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 FOXI3A8MTJ6 420 aaPredicted RBP13.97□□□□□ -0.17
FOXN4-203ENST00000423960 ZNF728P0DKX0 622 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 MMP9P14780 707 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 CCL3L1P16619 93 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 TMEM50BP56557 158 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 SPCS2Q15005 226 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 TRAPPC6BQ86SZ2 158 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 Q8N7P7 452 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 ZNF565Q8N9K5 539 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 NANPQ8TBE9 248 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 UPRTQ96BW1 309 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 KCTD12Q96CX2 325 aaKnown RBP13.97□□□□□ -0.17
FOXN4-203ENST00000423960 MDFIQ99750 246 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 HSF4Q9ULV5 492 aa13.97□□□□□ -0.17
FOXN4-203ENST00000423960 H3BMQ9 156 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 CA11O75493 328 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 MT-ND4P03905 459 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 SRP14P37108 136 aaKnown RBP13.96□□□□□ -0.17
FOXN4-203ENST00000423960 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 ZNF497Q6ZNH5 498 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 TCF23Q7RTU1 214 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 OR10R2Q8NGX6 335 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 ARHGAP5-AS1Q96IT6 56 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 ZNF714Q96N38 554 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 TBX15Q96SF7 602 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 PECRQ9BY49 303 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
FOXN4-203ENST00000423960 RHBDL2Q9NX52 303 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 TAS2R3Q9NYW6 316 aa13.96□□□□□ -0.17
FOXN4-203ENST00000423960 SVEP1Q4LDE5 3571 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 C17orf98A8MV24 154 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 RAB27BO00194 218 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 ZNF182P17025 639 aaPredicted RBP13.95□□□□□ -0.18
FOXN4-203ENST00000423960 PRTN3P24158 256 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 DLX6P56179 175 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 MOGAT2Q3SYC2 334 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 PLAC9Q5JTB6 97 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 VMO1Q7Z5L0 202 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 ACOT12Q8WYK0 555 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 DYRK2Q92630 601 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 RAB3CQ96E17 227 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 CYYR1Q96J86 154 aa13.95□□□□□ -0.18
FOXN4-203ENST00000423960 WNK2Q9Y3S1 2297 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 SCGNO76038 276 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 RBP4P02753 201 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 GZMHP20718 246 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 SOX6P35712 828 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 GLP1RP43220 463 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 ERVFRD-1P60508 538 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 DYNC1I2Q13409 638 aaKnown RBP13.94□□□□□ -0.18
FOXN4-203ENST00000423960 RTN4RL2Q86UN3 420 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 GAPTQ8N292 157 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 OR13A1Q8NGR1 328 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 MRGPRDQ8TDS7 321 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 CCDC107Q8WV48 283 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 AP3S1Q92572 193 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 RBM38Q9H0Z9 239 aaKnown RBP13.94□□□□□ -0.18
FOXN4-203ENST00000423960 GAL3ST2Q9H3Q3 398 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 UNKLQ9H9P5 680 aaKnown RBP13.94□□□□□ -0.18
FOXN4-203ENST00000423960 SIRT7Q9NRC8 400 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
FOXN4-203ENST00000423960 TRAV39A0A0B4J263 110 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 KBTBD11-OT1A0A1B0GTJ5 212 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 ZNF729A6NN14 1252 aaPredicted RBP13.93□□□□□ -0.18
FOXN4-203ENST00000423960 CGB3P0DN86 165 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 CGB7P0DN87 165 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 KLF17Q5JT82 389 aaPredicted RBP13.93□□□□□ -0.18
FOXN4-203ENST00000423960 MZT2AQ6P582 158 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 OR4K15Q8NH41 348 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 LHX4Q969G2 390 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 PHF21AQ96BD5 680 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 SLC25A38Q96DW6 304 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 RIMS4Q9H426 269 aaPredicted RBP13.93□□□□□ -0.18
FOXN4-203ENST00000423960 NDUFA13Q9P0J0 144 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 COMMD3Q9UBI1 195 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 RSL24D1Q9UHA3 163 aaKnown RBP13.93□□□□□ -0.18
FOXN4-203ENST00000423960 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
FOXN4-203ENST00000423960 SMIM31A0A1B0GVY4 71 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 ZNF701M0R085 212 aaPredicted RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 FSHBP01225 129 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 HIST1H1DP16402 221 aaKnown RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 GNB3P16520 340 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 DLX1P56177 255 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 PRB3Q04118 309 aaPredicted RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 ARL6IP1Q15041 203 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 UBE2NLQ5JXB2 153 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 GPR157Q5UAW9 335 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 SAMD12Q8N8I0 201 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 MRPL30Q8TCC3 161 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms