RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ADCYAP1P18509 176 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 CD80P33681 288 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 EDDM3AQ14507 147 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 TMEM187Q14656 261 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 FAM117AQ9C073 453 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 TLNRD1Q9H1K6 362 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 SLC25A32Q9H2D1 315 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 CDH20Q9HBT6 801 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
PTPRN-204ENST00000423636 ZDHHC8Q9ULC8 765 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 DEGS1O15121 323 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PRH1P02810 166 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 DAOP14920 347 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 RUNX1Q01196 453 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PSG7Q13046 419 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 SPRNQ5BIV9 151 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 BTNL3Q6UXE8 466 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 LRP11Q86VZ4 500 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF695Q8IW36 515 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF610Q8N9Z0 462 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 OR4A4PQ8NGN8 299 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 TSNAXQ99598 290 aaKnown RBP10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PRRX2Q99811 253 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 DHRS9Q9BPW9 319 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PRDM14Q9GZV8 571 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 MYOZ1Q9NP98 299 aaPredicted RBP10.15□□□□□ -0.78
PTPRN-204ENST00000423636 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 WRBO00258 174 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
PTPRN-204ENST00000423636 PPP1CBP62140 327 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 AESQ08117 197 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 SMCO1Q147U7 214 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 FAM58AQ8N1B3 248 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 ZCCHC24Q8N2G6 241 aaKnown RBP10.15□□□□□ -0.78
PTPRN-204ENST00000423636 OR10V1Q8NGI7 309 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 SCGB3A2Q96PL1 93 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF71Q9NQZ8 489 aaPredicted RBP10.15□□□□□ -0.78
PTPRN-204ENST00000423636 TRAPPC2LQ9UL33 140 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 ANAPC10Q9UM13 185 aa10.15□□□□□ -0.78
PTPRN-204ENST00000423636 IGHV3OR15-7A0A075B7D8 119 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 A8MXK9 166 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 TK1P04183 234 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 IAPPP10997 89 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF154Q13106 437 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 COLCA1Q6ZS62 124 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 SCCPDHQ8NBX0 429 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 BCL2L2Q92843 193 aaPredicted RBP10.15□□□□□ -0.79
PTPRN-204ENST00000423636 USB1Q9BQ65 265 aaKnown RBP10.15□□□□□ -0.79
PTPRN-204ENST00000423636 MEMO1Q9Y316 297 aa10.15□□□□□ -0.79
PTPRN-204ENST00000423636 KIAA1324LA8MWY0 1029 aaPredicted RBP10.14□□□□□ -0.79
PTPRN-204ENST00000423636 GPR37O15354 613 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 ZP3P21754 424 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 ZNF83P51522 516 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 FAHD2BQ6P2I3 314 aaPredicted RBP10.14□□□□□ -0.79
PTPRN-204ENST00000423636 TFAP2EQ6VUC0 442 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 OR5P3Q8WZ94 311 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 FAHD2AQ96GK7 314 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 MPPED1O15442 326 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 KLK10O43240 276 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 SLC34A2O95436 690 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 PSG2P11465 335 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM182Q6ZP80 229 aaPredicted RBP10.14□□□□□ -0.79
PTPRN-204ENST00000423636 Q6ZRG5 221 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 ZFP82Q8N141 532 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM178AQ8NBL3 297 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 MARC2Q969Z3 335 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 DLL3Q9NYJ7 618 aa10.14□□□□□ -0.79
PTPRN-204ENST00000423636 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 PPT1P50897 306 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 CYCSP99999 105 aaKnown RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM45BQ96B21 275 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 MSI2Q96DH6 328 aaKnown RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 PSPNO60542 156 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 OR2H2O95918 312 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 MPZP25189 248 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 FGF12P61328 243 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 RNPS1Q15287 305 aaKnown RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 C22orf34Q6ZV56 151 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 DPPA2Q7Z7J5 298 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 DEFB108BQ8NET1 73 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 MUC1P15941 1255 aaPredicted RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 HLA-GP17693 338 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 COL8A2P25067 703 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 TBC1D28Q2M2D7 210 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 KRTAP27-1Q3LI81 207 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 DHRS11Q6UWP2 260 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 LIAT1Q6ZQX7 453 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 PUSL1Q8N0Z8 303 aaKnown RBP10.13□□□□□ -0.79
PTPRN-204ENST00000423636 LEAP2Q969E1 77 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 SPSB4Q96A44 273 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 Q9N2K0 584 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 ASCL3Q9NQ33 180 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 VPS13CQ709C8 3753 aa10.13□□□□□ -0.79
PTPRN-204ENST00000423636 DEDDO75618 318 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms