RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 AKIRIN2Q53H80 203 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 TBC1D26Q86UD7 250 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 SLC35G3Q8N808 338 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 MOB3AQ96BX8 217 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 GMPPAQ96IJ6 420 aaPredicted RBP9.34□□□□□ -0.91
DDX56-203ENST00000421223 ZDHHC11Q9H8X9 412 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ASCL3Q9NQ33 180 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 FBXL17Q9UF56 701 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 NBASA2RRP1 2371 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 HKR1P10072 659 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 CAV2P51636 162 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 RPP30P78346 268 aaKnown RBP9.34□□□□□ -0.91
DDX56-203ENST00000421223 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 PIP4P1Q86T03 277 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 LGI3Q8N145 548 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 CCDC71LQ8N9Z2 235 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 C9orf106Q8NAJ2 232 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 RNASE11Q8TAA1 199 aaKnown RBP9.34□□□□□ -0.91
DDX56-203ENST00000421223 KIRREL1Q96J84 757 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 Q9N2K0 584 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 CUL9Q8IWT3 2517 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 NKX2-6A6NCS4 301 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 MPPED1O15442 326 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 MED6O75586 246 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ZNF818PQ6ZRF7 136 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ERGIC1Q969X5 290 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 MARC2Q969Z3 335 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ADAT1Q9BUB4 502 aaKnown RBP9.34□□□□□ -0.91
DDX56-203ENST00000421223 MSL2Q9HCI7 577 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ERRFI1Q9UJM3 462 aaPredicted RBP9.34□□□□□ -0.91
DDX56-203ENST00000421223 TRAPPC2LQ9UL33 140 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 TRAV17A0A0B4J275 112 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 CDRT15L2A8MXV6 281 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
DDX56-203ENST00000421223 HERPUD1Q15011 391 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
DDX56-203ENST00000421223 KCNS2Q9ULS6 477 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 ARHGAP21Q5T5U3 1957 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 TRAV24A0A0B4J272 114 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 CNOT4O95628 575 aaKnown RBP9.33□□□□□ -0.92
DDX56-203ENST00000421223 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
DDX56-203ENST00000421223 MPV17P39210 176 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 NHLH2Q02577 135 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 CLINT1Q14677 625 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 SCCPDHQ8NBX0 429 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 OPN3Q9H1Y3 402 aaPredicted RBP9.33□□□□□ -0.92
DDX56-203ENST00000421223 DLL3Q9NYJ7 618 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 ZNF318Q5VUA4 2279 aa9.33□□□□□ -0.92
DDX56-203ENST00000421223 UCP2P55851 309 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 OR8G1Q15617 311 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 VHLLQ6RSH7 139 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 OR10J5Q8NHC4 309 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 LRRC46Q96FV0 321 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 AQP10Q96PS8 301 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 RTL8AQ9BWD3 113 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 SUCNR1Q9BXA5 334 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 DUSP13Q9UII6 198 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 PPP1R3CQ9UQK1 317 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 SPENQ96T58 3664 aaKnown RBP9.32□□□□□ -0.92
DDX56-203ENST00000421223 POLEQ07864 2286 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 IGKV1-6A0A0C4DH72 117 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 TRDCB7Z8K6 153 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 WNT9BO14905 357 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 SMPD2O60906 423 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 DEDDO75618 318 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 PSG7Q13046 419 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 WDR86Q86TI4 376 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 ZNF610Q8N9Z0 462 aa9.32□□□□□ -0.92
DDX56-203ENST00000421223 MSI2Q96DH6 328 aaKnown RBP9.32□□□□□ -0.92
DDX56-203ENST00000421223 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
DDX56-203ENST00000421223 ANKRD11Q6UB99 2663 aaPredicted RBP9.32□□□□□ -0.92
DDX56-203ENST00000421223 TRAV20A0A0B4J274 112 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 OR5B21A6NL26 309 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 ADAM20O43506 726 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 PRH1P02810 166 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 KIR2DS4P43632 304 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 ZNF616Q08AN1 781 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 ZNF154Q13106 437 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 IL15RAQ13261 267 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 KIR2DS1Q14954 304 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 CCDC36Q8IYA8 594 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 TMEM217Q8N7C4 229 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 STOML3Q8TAV4 291 aa9.31□□□□□ -0.92
DDX56-203ENST00000421223 TSNAXQ99598 290 aaKnown RBP9.31□□□□□ -0.92
DDX56-203ENST00000421223 OR51I2Q9H344 312 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms