RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 SPINK2P20155 84 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 KIR2DL2P43627 348 aaPredicted RBP16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 P2RY1P47900 373 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 NOVA1P51513 510 aaKnown RBP16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 IDH3GP51553 393 aaPredicted RBP16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 ATRAIDQ6UW56 229 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 IL34Q6ZMJ4 242 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 BOLLQ8N9W6 283 aaKnown RBP16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 SECTM1Q8WVN6 248 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 RDH5Q92781 318 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 POMT1Q9Y6A1 747 aa16.1■□□□□ 0.17
CROCCP3-202ENST00000420820 A0A1W2PR80 420 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 ZNF705EA8MWA4 302 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 C3orf80F5H4A9 247 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 HS3ST1O14792 307 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 GPR137BO60478 399 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 CEACAM4O75871 244 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 SHEQ5VZ18 495 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 ZNF324BQ6AW86 544 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 Q8IYB0 196 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 SELENOHQ8IZQ5 122 aaKnown RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 ZNF565Q8N9K5 539 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 SCCPDHQ8NBX0 429 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 CACNA1GO43497 2377 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 DUXBA0A1W2PPF3 345 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 CLEC18AA5D8T8 446 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 NPIPB11E5RHQ5 1161 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 CBR1P16152 277 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 UCP1P25874 307 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 UCP2P55851 309 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 ERVS71-1P61550 626 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 HLA-DRB3P79483 266 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 TAGLNQ01995 201 aaKnown RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 C10orf91Q5T1B1 145 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 MEX3BQ6ZN04 569 aaKnown RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 CLEC18CQ8NCF0 446 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 C1orf162Q8NEQ5 155 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 LILRB1Q8NHL6 650 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 SLC25A40Q8TBP6 338 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 WNT2BQ93097 391 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 BSCL2Q96G97 398 aaPredicted RBP16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 NRIP2Q9BQI9 281 aa16.09■□□□□ 0.17
CROCCP3-202ENST00000420820 NKX2-6A6NCS4 301 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 DEGS1O15121 323 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 IGKV3-15P01624 115 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 PJVKQ0ZLH3 352 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 ALKBH6Q3KRA9 238 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 H1FOOQ8IZA3 346 aaPredicted RBP16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 WDR31Q8NA23 367 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 C9orf106Q8NAJ2 232 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 CCL28Q9NRJ3 127 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 RCL1Q9Y2P8 373 aaKnown RBP16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 POLDIP2Q9Y2S7 368 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF292O60281 2723 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 LOC400499M0QZD8 3231 aa16.08■□□□□ 0.16
CROCCP3-202ENST00000420820 ABCD4O14678 606 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 SIGLEC5O15389 551 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 ACAA1P09110 424 aaPredicted RBP16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 WNT2P09544 360 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 PGA5P0DJD9 388 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 MDH2P40926 338 aaKnown RBP16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 PSG7Q13046 419 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF273Q14593 569 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 SPIN3Q5JUX0 258 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 PXDC1Q5TGL8 231 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 LRRC46Q96FV0 321 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 WFDC1Q9HC57 220 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 UBE2J1Q9Y385 318 aaPredicted RBP16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 SELEP16581 610 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 LPAR6P43657 344 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 SRSF3P84103 164 aaKnown RBP16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF154Q13106 437 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF146Q15072 292 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 NMSQ5H8A3 153 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 IL22RA2Q969J5 263 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 SARAFQ96BY9 339 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 ADAT1Q9BUB4 502 aaKnown RBP16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 OR2W1Q9Y3N9 320 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 DMXL1Q9Y485 3027 aa16.07■□□□□ 0.16
CROCCP3-202ENST00000420820 H0Y980 276 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 SLC33A1O00400 549 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ATG12O94817 140 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ADCYAP1P18509 176 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 VWA1Q6PCB0 445 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 BTNL8Q6UX41 500 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF497Q6ZNH5 498 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF695Q8IW36 515 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 OR1J1Q8NGS3 322 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 LYPD6BQ8NI32 183 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ABHD14BQ96IU4 210 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 SMIM3Q9BZL3 60 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 PARP11Q9NR21 331 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 TMEM210A6NLX4 147 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 C1QTNF9BB2RNN3 333 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 HSD17B6O14756 317 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 PGLYRP1O75594 196 aaPredicted RBP16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 OR2H2O95918 312 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF44P15621 663 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 MOB1BQ7L9L4 216 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms