RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 RPL36Q9Y3U8 105 aaKnown RBP13.8□□□□□ -0.2
MSH6-203ENST00000420813 A0A1W2PPI3 338 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 SH2D7A6NKC9 451 aaPredicted RBP13.79□□□□□ -0.2
MSH6-203ENST00000420813 CLIC3O95833 236 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 CD2P06729 351 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 RAB7AP51149 207 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 MADCAM1Q13477 382 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 RSU1Q15404 277 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 KLHL22Q53GT1 634 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 C9orf152Q5JTZ5 239 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 C10orf99Q6UWK7 81 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 OR8H3Q8N146 312 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 OR51A2Q8NGJ7 313 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 PSG11Q9UQ72 335 aa13.79□□□□□ -0.2
MSH6-203ENST00000420813 LOC100130705A0A1B0GUX0 176 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 FGF16O43320 207 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 SNRNP70P08621 437 aaKnown RBP13.78□□□□□ -0.2
MSH6-203ENST00000420813 LIMS3P0CW19 117 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 LIMS4P0CW20 117 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 CCDC58Q4VC31 144 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 NHLRC3Q5JS37 347 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 OR56B4Q8NH76 319 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 PLPPR1Q8TBJ4 325 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 GPR148Q8TDV2 347 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 RGP1Q92546 391 aaPredicted RBP13.78□□□□□ -0.2
MSH6-203ENST00000420813 FAM192AQ9GZU8 254 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 IFT22Q9H7X7 185 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 TAS2R4Q9NYW5 299 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 IL36GQ9NZH8 169 aa13.78□□□□□ -0.2
MSH6-203ENST00000420813 SOX2P48431 317 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 GTF2A1P52655 376 aaPredicted RBP13.77□□□□□ -0.21
MSH6-203ENST00000420813 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 RPL22L1Q6P5R6 122 aaKnown RBP13.77□□□□□ -0.21
MSH6-203ENST00000420813 DRAM1Q8N682 238 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 MRGPRDQ8TDS7 321 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 APH1BQ8WW43 257 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 LEAP2Q969E1 77 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 SLC29A1Q99808 456 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 DPCDQ9BVM2 203 aaPredicted RBP13.77□□□□□ -0.21
MSH6-203ENST00000420813 FGF20Q9NP95 211 aaPredicted RBP13.77□□□□□ -0.21
MSH6-203ENST00000420813 FAM118AQ9NWS6 357 aa13.77□□□□□ -0.21
MSH6-203ENST00000420813 HTR3BO95264 441 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 MPIG6BO95866 241 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 TMEM11P17152 192 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 SSTR5P35346 364 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 HES1Q14469 280 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 LINC00596Q86U02 117 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 C5orf56Q8N8D9 126 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 LINC00482Q8N8I6 264 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 OR51D1Q8NGF3 324 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 OR10K1Q8NGX5 313 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 CHPT1Q8WUD6 406 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 TMEM106AQ96A25 262 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 GPR61Q9BZJ8 451 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 TMEM138Q9NPI0 162 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 ST3GAL6Q9Y274 331 aa13.76□□□□□ -0.21
MSH6-203ENST00000420813 IGHV3-7P01780 117 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 GZMHP20718 246 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 SLC6A1P30531 599 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 GNG10P50151 68 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 RBM11P57052 281 aaKnown RBP13.75□□□□□ -0.21
MSH6-203ENST00000420813 PPP3R1P63098 170 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 ZNF816Q0VGE8 651 aaPredicted RBP13.75□□□□□ -0.21
MSH6-203ENST00000420813 DIAPH2-AS1Q14236 149 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 LTC4SQ16873 150 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 MPV17LQ2QL34 196 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 OR10X1Q8NGY0 326 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 RFESDQ8TAC1 157 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 METTL9Q9H1A3 318 aa13.75□□□□□ -0.21
MSH6-203ENST00000420813 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
MSH6-203ENST00000420813 TMEM30CPA0ZSE6 113 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 K7EIL1 84 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 ZNF780AO75290 641 aaPredicted RBP13.74□□□□□ -0.21
MSH6-203ENST00000420813 OR7C1O76099 320 aaPredicted RBP13.74□□□□□ -0.21
MSH6-203ENST00000420813 CDRT1O95170 752 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 CSTBP04080 98 aaKnown RBP13.74□□□□□ -0.21
MSH6-203ENST00000420813 DCKP27707 260 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 ZNF93P35789 620 aaPredicted RBP13.74□□□□□ -0.21
MSH6-203ENST00000420813 RPL23AP62750 156 aaKnown RBP13.74□□□□□ -0.21
MSH6-203ENST00000420813 EGFEM1PQ0D2K5 195 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 EBI3Q14213 229 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 DDI2Q5TDH0 399 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 XAF1Q6GPH4 301 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 TMPRSS11AQ6ZMR5 421 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 PQLC1Q8N2U9 271 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 COMMD1Q8N668 190 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 OR52M1Q8NGK5 317 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 OR52N1Q8NH53 320 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 S100A14Q9HCY8 104 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 ZFP57Q9NU63 452 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 ING4Q9UNL4 249 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 COL7A1Q02388 2944 aa13.74□□□□□ -0.21
MSH6-203ENST00000420813 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 HSD17B6O14756 317 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms