RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 IDI2-AS1Q9NZ38 188 aa10.07□□□□□ -0.8
LINC00339-203ENST00000420503 AASSQ9UDR5 926 aa10.07□□□□□ -0.8
LINC00339-203ENST00000420503 MYRFQ9Y2G1 1151 aa10.07□□□□□ -0.8
LINC00339-203ENST00000420503 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
LINC00339-203ENST00000420503 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 HSD17B6O14756 317 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 FGF16O43320 207 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 IL1AP01583 271 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 MADCAM1Q13477 382 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 PIGYQ3MUY2 71 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 PAN3Q58A45 887 aaKnown RBP10.06□□□□□ -0.8
LINC00339-203ENST00000420503 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
LINC00339-203ENST00000420503 OVCH2Q7RTZ1 564 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 Q8N6K4 173 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 CREB3L1Q96BA8 519 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 SPSB1Q96BD6 273 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 GABARAPL3Q9BY60 117 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 PRRG3Q9BZD7 231 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
LINC00339-203ENST00000420503 IGHV3-43A0A0B4J1X8 118 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 FUOMA2VDF0 154 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR4C45A6NMZ5 311 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 NCBP2LA6PVI3 153 aaKnown RBP10.05□□□□□ -0.8
LINC00339-203ENST00000420503 NPIPB11E5RHQ5 1161 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 EI24O14681 340 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 SLC31A2O15432 143 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 RAMP3O60896 148 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 IGHV3-43DP0DP04 118 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 TMEM225BP0DP42 221 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 SLC35B1P78383 322 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 CFHR3Q02985 330 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 GPR50Q13585 617 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 ZNF260Q3ZCT1 412 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 FAM220AQ7Z4H9 259 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 FOXRED2Q8IWF2 684 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR51A2Q8NGJ7 313 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR5M8Q8NGP6 311 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR13C3Q8NGS6 347 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 C10orf35Q96D05 121 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR5B12Q96R08 314 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 RIBC2Q9H4K1 309 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 GNB4Q9HAV0 340 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 OR6C3Q9NZP0 311 aa10.05□□□□□ -0.8
LINC00339-203ENST00000420503 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-203ENST00000420503 HYDINQ4G0P3 5121 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 LY86O95711 162 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 OCM2P0CE71 109 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 OCMP0CE72 109 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-203ENST00000420503 ATP6V1E1P36543 226 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 ALDH3A2P51648 485 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
LINC00339-203ENST00000420503 FHL3Q13643 280 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 KIR2DS1Q14954 304 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 PNLIPRP3Q17RR3 467 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 TMEM244Q5VVB8 128 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 TEX38Q6PEX7 206 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 CBR4Q8N4T8 237 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 CHST4Q8NCG5 386 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 CCDC54Q8NEL0 328 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 OR10X1Q8NGY0 326 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 CNIH3Q8TBE1 160 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 PELI1Q96FA3 418 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 RCHY1Q96PM5 261 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 SLC29A1Q99808 456 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 C9orf16Q9BUW7 83 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 ABCG5Q9H222 651 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 KLK15Q9H2R5 256 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 LINC00574Q9H8X3 128 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 ENOPH1Q9UHY7 261 aa10.04□□□□□ -0.8
LINC00339-203ENST00000420503 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-203ENST00000420503 E9PI62 339 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 J3QRE1 110 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 AP4M1O00189 453 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 CCRL2O00421 344 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 GABRPO00591 440 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 BAG2O95816 211 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 MT-ND2P03891 347 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 ISG15P05161 165 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 HCKP08631 526 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 RAB7AP51149 207 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 F2RL1P55085 397 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 KIAA0141Q14154 515 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-203ENST00000420503 EBI3Q14213 229 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 RCN1Q15293 331 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 KISS1Q15726 138 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 CXorf66Q5JRM2 361 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-203ENST00000420503 ZNF691Q5VV52 312 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 ZFAND6Q6FIF0 208 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 OR8H3Q8N146 312 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 COMMD1Q8N668 190 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 TMEM104Q8NE00 496 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 C4orf36Q96KX1 117 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-203ENST00000420503 ZCCHC4Q9H5U6 513 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms