RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PLAC9Q5JTB6 97 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 RNFT1Q5M7Z0 435 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 TGIF2LXQ8IUE1 241 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 C20orf196Q8IYI0 205 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 CSNK2A3Q8NEV1 391 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 EHFQ9NZC4 300 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 MMP24Q9Y5R2 645 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 CNTRLQ7Z7A1 2325 aa12.77□□□□□ -0.37
SEMA4D-204ENST00000420101 P2RY10O00398 339 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CYB5BO43169 146 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 DFFBO76075 338 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 MBPP02686 304 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CXCL1P09341 107 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 FREM3P0C091 2139 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 FABP4P15090 132 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 MSR1P21757 451 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CDPF1Q6NVV7 123 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 GLIPR1L1Q6UWM5 242 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CALHM2Q9HA72 323 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 FAM206AQ9NX38 181 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CLDN34H7C241 214 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 M0QZK8 103 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 ST8SIA3O43173 380 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 GGCTO75223 188 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CEACAM4O75871 244 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 TRGC2P03986 189 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 OPN1MWP04001 364 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF20P17024 532 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 DUSP1P28562 367 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 TMEM50BP56557 158 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 USF2Q15853 346 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 FOXRED2Q8IWF2 684 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 GNPNAT1Q96EK6 184 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 NKX3-1Q99801 234 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 SYT3Q9BQG1 590 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 OR10A2Q9H208 303 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 CRLF2Q9HC73 371 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 LHFPL6Q9Y693 200 aa12.76□□□□□ -0.37
SEMA4D-204ENST00000420101 GVINP1Q7Z2Y8 2422 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 A0A0A6YYD4 124 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 MPIG6BO95866 241 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 TTRP02766 147 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 OR5H8P0DN80 308 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 OR8G1Q15617 311 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 FAM213BQ8TBF2 198 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 C1orf147Q96MC9 270 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 ALKBH3Q96Q83 286 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 SOX7Q9BT81 388 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 ZDHHC11Q9H8X9 412 aa12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF878C9JN71 531 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 RER1O15258 196 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 SOCS1O15524 211 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 METTL15P1P0C7V9 234 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 SERPINA2P20848 420 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 TLE4Q04727 773 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 SLC16A14Q7RTX9 510 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 TUSC5Q8IXB3 177 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 PBOV1Q9GZY1 135 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 GPR84Q9NQS5 396 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 VAX2Q9UIW0 290 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 TRAV1-1A0A0B4J248 108 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 FOXI3A8MTJ6 420 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 SCAF4O95104 1147 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 CYB5R3P00387 301 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 PI3P19957 117 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 NTF4P34130 210 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 RND3P61587 244 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 TNFRSF9Q07011 255 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 GAGE1Q13065 139 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 GNMTQ14749 295 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 TAF9Q16594 264 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 P4HA3Q7Z4N8 544 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 ABHD5Q8WTS1 349 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 ADAT3Q96EY9 351 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 WDYHV1Q96HA8 205 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms