RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 DNAJC13O75165 2243 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 RPL36A-HNRNPH2H7BZ11 118 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 CFIP05156 583 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 S100A2P29034 98 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SRYQ05066 204 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 CPEB3Q8NE35 698 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 Q8WTZ3 238 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 IER2Q9BTL4 223 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 TGIF2-C20orf24A0A0A6YYL0 155 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF716A6NP11 495 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 CYB5BO43169 146 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 CXCL1P09341 107 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 OTX2P32243 289 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 PCBD1P61457 104 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 OR8B8Q15620 311 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 IFI44Q8TCB0 444 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 WDR54Q9H977 334 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 GPR35Q9HC97 309 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SIT1Q9Y3P8 196 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 LOC102723996A0A087X1L8 192 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 ZFP92A6NM28 416 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 SCAF4O95104 1147 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 LMO1P25800 156 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 HLA-BQ31612 363 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 IL1F10Q8WWZ1 152 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 DOK5Q9P104 306 aa13.03□□□□□ -0.32
SEMA3B-203ENST00000419007 HS3ST1O14792 307 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 RAB11AP62491 216 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 ICAM4Q14773 271 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM56Q96MV1 263 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 OR51B6Q9H340 312 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM56-RWDD3S4R434 201 aa13.02□□□□□ -0.32
SEMA3B-203ENST00000419007 VDAC1P21796 283 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 ERVFRD-1P60508 538 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 PRDX4Q13162 271 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 HNF4GQ14541 408 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 DAZAP2Q15038 168 aaPredicted RBP13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 C17orf78Q8N4C9 275 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 SAP25Q8TEE9 199 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 RDH5Q92781 318 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 CRIM1Q9NZV1 1036 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 ESPL1Q14674 2120 aa13.02□□□□□ -0.33
SEMA3B-203ENST00000419007 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 PPIHO43447 177 aaKnown RBP13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 GDF1P27539 372 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 MLF1P58340 268 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 TLE4Q04727 773 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 GGNQ86UU5 652 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 TVP23CQ96ET8 276 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF488Q96MN9 340 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 Q9N2K0 584 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF391Q9UJN7 358 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 B3GALT5-AS1P59052 145 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 ELOBQ15370 118 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 KIAA2026Q5HYC2 2103 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 STX12Q86Y82 276 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 SRD5A2P31213 254 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 STARD6P59095 220 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 C4orf17Q53FE4 359 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF610Q8N9Z0 462 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 OR2V1Q8NHB1 315 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 SMDT1Q9H4I9 107 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
SEMA3B-203ENST00000419007 A0A1B0GW64 132 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 BTBD17A6NE02 478 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF732B4DXR9 585 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 TRAPPC2LH3BP13 241 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 IFNA5P01569 189 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 SERPINE2P07093 398 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 FOLR3P41439 243 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 CLDN15P56746 228 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 M1APQ8TC57 530 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 SIGLEC12Q96PQ1 595 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 PFDN5Q99471 154 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 RSG1Q9BU20 258 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 IGHV2-70P01814 119 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 TRGC2P03986 189 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 FGF5P12034 268 aa13□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms