RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PRDM14Q9GZV8 571 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 POLEQ07864 2286 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 FBXW9Q5XUX1 488 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 GGNBP1Q5YKI7 109 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 MYO7BQ6PIF6 2116 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF552Q9H707 407 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-205ENST00000418258 SPTBN1Q01082 2364 aaKnown RBP9.86□□□□□ -0.83
PTCH1-205ENST00000418258 GZMHP20718 246 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 RNF212Q495C1 297 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 C16orf82Q7Z2V1 217 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 MDP1Q86V88 176 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 FAM222BQ8WU58 562 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 CCL19Q99731 98 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TTTY12Q9BZ98 90 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 GREB1Q4ZG55 1949 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 IGHV3OR16-12A0A075B7B8 117 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF207O43670 478 aaKnown RBP9.86□□□□□ -0.83
PTCH1-205ENST00000418258 LIFP15018 202 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 PNLIPP16233 465 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 DHRS2Q13268 280 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 COL19A1Q14993 1142 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ATP6V1FQ16864 119 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 KRTCAP3Q53RY4 240 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TEX29Q8N6K0 151 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM167BQ9NRX6 74 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 SFT2D2O95562 160 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 FUCA1P04066 466 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TFPI2P48307 235 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TSPO2Q5TGU0 170 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 SRD5A3Q9H8P0 318 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 KIR3DL2P43630 455 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ERVFRD-1P60508 538 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 CCL8P80075 99 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ROM1Q03395 351 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 OR4C5Q8NGB2 326 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 OR2H1Q9GZK4 316 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 GPR35Q9HC97 309 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 PSME4Q14997 1843 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 C5orf67F2Z3F1 127 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 PSG5Q15238 335 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 FHL5Q5TD97 284 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 VN1R4Q7Z5H5 301 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 SLC25A42Q86VD7 318 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF561Q8N587 486 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 STARD4Q96DR4 205 aa9.86□□□□□ -0.83
PTCH1-205ENST00000418258 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
PTCH1-205ENST00000418258 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-205ENST00000418258 LINC00299Q6ZSB3 139 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 OR2C3Q8N628 320 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 SSMEM1Q8WWF3 244 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 WDR54Q9H977 334 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 EXOGQ9Y2C4 368 aaKnown RBP9.85□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM210A6NLX4 147 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 CST4P01036 141 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 CSN3P07498 182 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 CCKARP32238 428 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 HERVK_113P61574 105 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 NSUN5P2Q63ZY6 315 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 SLC23A3Q6PIS1 610 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 ANK1P16157 1881 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PPIAL4EA0A075B759 164 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PPIAL4DF5H284 164 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 HRKO00198 91 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PPIAL4FP0DN26 164 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 COL8A1P27658 744 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF273Q14593 569 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 FAM219BQ5XKK7 198 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 SCGB1D4Q6XE38 83 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 FAM210BQ96KR6 192 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PPIAL4AQ9Y536 164 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 P01737 135 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 COL10A1Q03692 680 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 CD226Q15762 336 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 C10orf113Q5VZT2 155 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 OR2J1Q9GZK6 312 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 TMEFF2Q9UIK5 374 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-205ENST00000418258 IL13RA2Q14627 380 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF770Q6IQ21 691 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-205ENST00000418258 SSX8Q7RTT4 187 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 RNF122Q9H9V4 155 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 MFNGO00587 321 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PF4V1P10720 104 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 SULT1A1P50225 295 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 EBLN2Q6P2I7 272 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 Q6ZN92 141 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 MUC20Q8N307 709 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-205ENST00000418258 OR4P4Q8NGL7 312 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 KCNK15Q9H427 330 aa9.85□□□□□ -0.83
PTCH1-205ENST00000418258 PIGYQ3MUY2 71 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 FAM78BQ5VT40 261 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF680Q8NEM1 530 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 MANBALQ9NQG1 85 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 NTN1O95631 604 aa9.84□□□□□ -0.83
PTCH1-205ENST00000418258 KIR2DL1P43626 348 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 KIR2DL2P43627 348 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-205ENST00000418258 WNT3P56703 355 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms