RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 RABEPKQ7Z6M1 372 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 OPA3Q9H6K4 179 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 HDGFL3Q9Y3E1 203 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 KPTNQ9Y664 436 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 ALDH3B1P43353 468 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 CEP295Q9C0D2 2601 aa11.4□□□□□ -0.58
TNFRSF8-203ENST00000417814 DBX1A6NMT0 343 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 LILRA1O75019 489 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 TBPP20226 339 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 FAHD2BQ6P2I3 314 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 LIAT1Q6ZQX7 453 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZNF818PQ6ZRF7 136 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 MKXQ8IYA7 352 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 AGBL5Q8NDL9 886 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 PP6455Q8WZ26 134 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 FAHD2AQ96GK7 314 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 GPR61Q9BZJ8 451 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZNF665Q9H7R5 613 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 CACFD1Q9UGQ2 172 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 TRAPPC2LQ9UL33 140 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 H3BQ15 152 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 CLDN1O95832 211 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 TRGC2P03986 189 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 UBE2G2P60604 165 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 BTNL3Q6UXE8 466 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 Q96M66 194 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 MOB1AQ9H8S9 216 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 CARHSP1Q9Y2V2 147 aaKnown RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 MPPED1O15442 326 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 CTSDP07339 412 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 RPS2P15880 293 aaKnown RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 IDH3GP51553 393 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 ATP1A1-AS1Q5TC04 95 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
TNFRSF8-203ENST00000417814 CRYM-AS1A6NIL9 109 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 SLC34A2O95436 690 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 IFNA5P01569 189 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 PSG2P11465 335 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 FUT3P21217 361 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 RAB5CP51148 216 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 DLK1P80370 383 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 EDDM3AQ14507 147 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZNF239Q16600 458 aaKnown RBP11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 PTX4Q96A99 478 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 SNX22Q96L94 193 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 DMRT1Q9Y5R6 373 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 WSB1Q9Y6I7 421 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 AP4M1O00189 453 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 RND3P61587 244 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 RAB1AP62820 205 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 PRDX4Q13162 271 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 CACNG5Q9UF02 275 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 CD300LBA8K4G0 201 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 LIFP15018 202 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 SNCAP37840 140 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 TMEM187Q14656 261 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 CCDC71LQ8N9Z2 235 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 OR10V1Q8NGI7 309 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZNF552Q9H707 407 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 GPR27Q9NS67 375 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 OR1A1Q9P1Q5 309 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 WASF3Q9UPY6 502 aa11.38□□□□□ -0.59
TNFRSF8-203ENST00000417814 GPR137BO60478 399 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 RHBDL1O75783 438 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 MT-ND4LP03901 98 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 G0S2P27469 103 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 RHEBQ15382 184 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 FAM189A2Q15884 450 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 BTNL8Q6UX41 500 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 IL22RA1Q8N6P7 574 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 METTL1Q9UBP6 276 aaKnown RBP11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 TIMM10BQ9Y5J6 103 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 PHOX2AO14813 284 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 PDCD6O75340 191 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 IFNA17P01571 189 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 EPHA8P29322 1005 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 ARG2P78540 354 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 VHLLQ6RSH7 139 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 CNEP1R1Q8N9A8 125 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 TMEM171Q8WVE6 324 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 SLC25A22Q9H936 323 aa11.37□□□□□ -0.59
TNFRSF8-203ENST00000417814 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms