RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
NUP50-204ENST00000417702 FOXJ3Q9UPW0 622 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 SIGLEC9Q9Y336 463 aa12.36□□□□□ -0.43
NUP50-204ENST00000417702 FAM172BPA6NC97 362 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 A6NDX4 124 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 MAS1P04201 325 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 GTF2F2P13984 249 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 NFYBP25208 207 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 GDNFP39905 211 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 SPHARQ15513 63 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 MED22Q15528 200 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 C17orf58Q2M2W7 97 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 RSBN1Q5VWQ0 802 aaPredicted RBP12.35□□□□□ -0.43
NUP50-204ENST00000417702 TMEM219Q86XT9 240 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 SUMF2Q8NBJ7 301 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 DERL3Q96Q80 235 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 YTHDF1Q9BYJ9 559 aaKnown RBP12.35□□□□□ -0.43
NUP50-204ENST00000417702 IFT22Q9H7X7 185 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 CALYQ9NYX4 217 aa12.35□□□□□ -0.43
NUP50-204ENST00000417702 MRPS28Q9Y2Q9 187 aaKnown RBP12.35□□□□□ -0.43
NUP50-204ENST00000417702 A0A087X0M5 115 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 A0A1B0GX30 115 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 MAGEA13PA6NCF6 341 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
NUP50-204ENST00000417702 BRS3P32247 399 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 CEACAM3P40198 252 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 EFNB2P52799 333 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 GABARAPL2P60520 117 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 PAX5Q02548 391 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 DOC2BQ14184 412 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
NUP50-204ENST00000417702 Q6ZTK2 550 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 PLPPR1Q8TBJ4 325 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 MUL1Q969V5 352 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 OR5M11Q96RB7 305 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
NUP50-204ENST00000417702 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
NUP50-204ENST00000417702 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 MRPS14O60783 128 aaKnown RBP12.33□□□□□ -0.44
NUP50-204ENST00000417702 IL1AP01583 271 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 IGLV1-47P01700 117 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 CGB3P0DN86 165 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 CGB7P0DN87 165 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 JUNBP17275 347 aaPredicted RBP12.33□□□□□ -0.44
NUP50-204ENST00000417702 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
NUP50-204ENST00000417702 HERPUD1Q15011 391 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 AWAT2Q6E213 333 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 OR9G1Q8NH87 305 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 NEK7Q8TDX7 302 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.44
NUP50-204ENST00000417702 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 PRSS22Q9GZN4 317 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
NUP50-204ENST00000417702 A0A1W2PP11 408 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 MEGF11A6BM72 1044 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 FAM90A22PA8MWA6 464 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 PIN1P1O15428 100 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 GPR50Q13585 617 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 CCDC144NLQ6NUI1 221 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 UFD1Q92890 307 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 MMP27Q9H306 513 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 ISYNA1Q9NPH2 558 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 ZNF581Q9P0T4 197 aa12.32□□□□□ -0.44
NUP50-204ENST00000417702 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
NUP50-204ENST00000417702 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 NPIPB11E5RHQ5 1161 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 PEX14O75381 377 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 HSMCR30P0CW71 290 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 GZMHP20718 246 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 MNDAP41218 407 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 MAP2K4P45985 399 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 TBCEQ15813 527 aaPredicted RBP12.31□□□□□ -0.44
NUP50-204ENST00000417702 LTC4SQ16873 150 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 ACSM3Q53FZ2 586 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
NUP50-204ENST00000417702 TPTE2P1Q5T6R2 138 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 C16orf82Q7Z2V1 217 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 Q8N2B8 174 aa12.31□□□□□ -0.44
NUP50-204ENST00000417702 SVOPQ8N4V2 548 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms