RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CHRNB4P30926 498 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 FXYD4P59646 89 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 PAX5Q02548 391 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 TMEM65Q6PI78 240 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 C20orf204Q6ZNR8 217 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 LILRB1Q8NHL6 650 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-205ENST00000417664 LRRC29Q8WV35 223 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 RTN4IP1Q8WWV3 396 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-205ENST00000417664 OR2V2Q96R30 315 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 DIRC2Q96SL1 478 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 SUCNR1Q9BXA5 334 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 NAA60Q9H7X0 242 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 SLC2A9Q9NRM0 540 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 IL19Q9UHD0 177 aa14.16□□□□□ -0.14
SSBP3-205ENST00000417664 DSPP15924 2871 aaKnown RBP14.16□□□□□ -0.14
SSBP3-205ENST00000417664 CADP27708 2225 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 TRBV6-7A0A0A0MS04 114 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 TMEM30CPA0ZSE6 113 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 C5orf51A6NDU8 294 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 ABCD4O14678 606 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 BET1O15155 118 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 SLC25A4P12235 298 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 RND3P61587 244 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 HERPUD1Q15011 391 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 ANKRD55Q3KP44 614 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 SLC35E4Q6ICL7 350 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 OR10J5Q8NHC4 309 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 PLPPR1Q8TBJ4 325 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 WDR89Q96FK6 387 aaPredicted RBP14.15□□□□□ -0.14
SSBP3-205ENST00000417664 OR14J1Q9UGF5 321 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 TRAPPC2LQ9UL33 140 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 POLEQ07864 2286 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 SHANK1Q9Y566 2161 aa14.15□□□□□ -0.14
SSBP3-205ENST00000417664 FAM25EA8MYX2 175 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 L7N2F9 121 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 CCSO14618 274 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 WNT9BO14905 357 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 ADH4P08319 380 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 RPA2P15927 270 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 RCC1P18754 421 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-205ENST00000417664 SERPINF1P36955 418 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 SORDQ00796 357 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 BSPH1Q075Z2 132 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 PCSK4Q6UW60 755 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 LRRC46Q96FV0 321 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 COQ3Q9NZJ6 369 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 SPTA1P02549 2419 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 IGKV1-6A0A0C4DH72 117 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 M0R233 179 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 CCL21O00585 134 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 C11orf87Q6NUJ2 197 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 LRTM2Q8N967 370 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 ZNF565Q8N9K5 539 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 PPP1R1CQ8WVI7 109 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 KIRREL1Q96J84 757 aa14.14□□□□□ -0.15
SSBP3-205ENST00000417664 ESRP2Q9H6T0 727 aaKnown RBP14.14□□□□□ -0.15
SSBP3-205ENST00000417664 FXYD6-FXYD2A0A087WZ82 144 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 TRAV14DV4A0A0A6YYC5 116 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 SPRY3O43610 288 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 PSPNO60542 156 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 SRPXP78539 464 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 HMGN3Q15651 99 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 H1FOOQ8IZA3 346 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-205ENST00000417664 PPP1R35Q8TAP8 253 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 SEC22AQ96IW7 307 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 WFIKKN1Q96NZ8 548 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 METTL8Q9H825 291 aaKnown RBP14.13□□□□□ -0.15
SSBP3-205ENST00000417664 KCNIP1Q9NZI2 227 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 NDRG3Q9UGV2 375 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 OR2W1Q9Y3N9 320 aa14.13□□□□□ -0.15
SSBP3-205ENST00000417664 PIGBOS1A0A0B4J2F0 54 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 C13orf42A0A1B0GVH6 325 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 C3orf80F5H4A9 247 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 GPR31O00270 319 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 ZNF205O95201 554 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 LHBP01229 141 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 IFNA21P01568 189 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 CXCL2P19875 107 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 S100GP29377 79 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 GNRHRP30968 328 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 TNFAIP6P98066 277 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-205ENST00000417664 ATXN7L3Q14CW9 347 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-205ENST00000417664 ZNF546Q86UE3 836 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 LDLRAD3Q86YD5 345 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 THAP6Q8TBB0 222 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 ITLN1Q8WWA0 313 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 RNASE6Q93091 150 aaKnown RBP14.12□□□□□ -0.15
SSBP3-205ENST00000417664 C2orf50Q96LR7 162 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 HEXA-AS1Q9H8Q6 139 aa14.12□□□□□ -0.15
SSBP3-205ENST00000417664 MPPED1O15442 326 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 ARPC5O15511 151 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 IGHV1-46P01743 117 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 CD55P08174 381 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 PSMB6P28072 239 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 S100A11P31949 105 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 PRDX2P32119 198 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 TMEM187Q14656 261 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 ADIPOQQ15848 244 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
SSBP3-205ENST00000417664 CMTM1Q8IZ96 169 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms