RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 DOCK11Q5JSL3 2073 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 UEVLDQ8IX04 471 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 KCNK17Q96T54 332 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 VDAC3Q9Y277 283 aa12.75□□□□□ -0.37
NCKIPSD-204ENST00000416649 M0QZK8 103 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 ADAM20O43506 726 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 GGCTO75223 188 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 GALNSP34059 522 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 MLF1P58340 268 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 HERV-K104P61576 105 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 MFAP5Q13361 173 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 PGAM5Q96HS1 289 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 LHFPL6Q9Y693 200 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 B4E171 279 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 DDAH2O95865 285 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 CLPSP04118 112 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 PFN1P07737 140 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 CCKARP32238 428 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 TSPAN7P41732 249 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 FBXW4P57775 412 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 DCAF7P61962 342 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 PLCXD2Q0VAA5 305 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 GAGE1Q13065 139 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 TESK1Q15569 626 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 TIPARPQ7Z3E1 657 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 CALHM1Q8IU99 346 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 PRSS50Q9UI38 385 aa12.74□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 E9PLN8 166 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 F5H5K5 113 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM50AO95807 157 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 PDGFBP01127 241 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 LCATP04180 440 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 C11orf42Q8N5U0 333 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 NAT6Q93015 286 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 CTDSP1Q9GZU7 261 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 PPIAL4AQ9Y536 164 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 SPRY1O43609 319 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 CHST1O43916 411 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 CD82P27701 267 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 BLKP51451 505 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 CCR5P51681 352 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 UCP3P55916 312 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 BSXQ3C1V8 233 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 BATF2Q8N1L9 274 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM170AQ8WVE7 144 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 WWTR1Q9GZV5 400 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 RBKSQ9H477 322 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DS5A0A0G2JLQ3 304 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 A0A0G2JNG1 304 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 A0A1W2PR80 420 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DS3K7RE56 304 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 NPIPB7O75200 414 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 IFNA5P01569 189 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR10J1P30954 320 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 GNRHRP30968 328 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 BRS3P32247 399 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 PLA2G5P39877 138 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 GABREP78334 506 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF92Q03936 586 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DS5Q14953 304 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR51G1Q8NGK1 321 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 IGHV3-20A0A0C4DH32 117 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DL5BA0A0G2JN68 375 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DL5BA0A0G2JPC4 375 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 C3orf85A0A1B0GTC6 90 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 RRP8O43159 456 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 CLRN1P58418 232 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 TAS2R30P59541 319 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 DOK3Q7L591 496 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 KIR2DL5AQ8N109 375 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 LRRC3CA6NJW4 275 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 CD27P26842 260 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 MSX1P28360 303 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 TMEM241Q24JQ0 296 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 H1FNTQ75WM6 255 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms