RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNF93P35789 620 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 ABCA11PQ4W5N1 156 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 NHLRC3Q5JS37 347 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 DDI2Q5TDH0 399 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 SLC16A12Q6ZSM3 486 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 OSR2Q8N2R0 312 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 SETD9Q8NE22 299 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 PLPPR1Q8TBJ4 325 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 SMIM19Q96E16 107 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 DPCDQ9BVM2 203 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 IFT22Q9H7X7 185 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 PAK1IP1Q9NWT1 392 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 ST3GAL6Q9Y274 331 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 SIRT4Q9Y6E7 314 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 ZNF780AO75290 641 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 CDRT1O95170 752 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 CLIC3O95833 236 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 LPLP06858 475 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 FAM106CPP0CH98 169 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 UTF1Q5T230 341 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 REC114Q7Z4M0 266 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 LINC00596Q86U02 117 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 SUMF2Q8NBJ7 301 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 OR52N1Q8NH53 320 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 MRGPRDQ8TDS7 321 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 CYGBQ8WWM9 190 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 TOMM40LQ969M1 308 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 TMEM80Q96HE8 168 aa14.03□□□□□ -0.16
PDLIM2-208ENST00000416159 TRBV5-5A0A0J9YX44 114 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A18PA6NE21 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A16PA6NEW6 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A20PA6NIJ5 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A12PA8MX19 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A5PA8MXJ8 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 GPX5O75715 221 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 OR7C1O76099 320 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A15PP0C7V4 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A13PP0C7W8 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A14PP0C7W9 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 FAM90A24PP0C7X0 464 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 GZMHP20718 246 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 RBM11P57052 281 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 RIPK1Q13546 671 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 DHRSXQ8N5I4 330 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 PACRGLQ8N7B6 248 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 RFESDQ8TAC1 157 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 GHSRQ92847 366 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 CLEC2DQ9UHP7 191 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 PSG11Q9UQ72 335 aa14.02□□□□□ -0.17
PDLIM2-208ENST00000416159 TCRBV4S1A1TA0A5B7 111 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 IGHV3-7P01780 117 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 AMY1AP04745 511 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 AMY2AP04746 511 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 IGFBP3P17936 291 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 SERPINA2P20848 420 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 RAB7AP51149 207 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 MADCAM1Q13477 382 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 GPR176Q14439 515 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 LTC4SQ16873 150 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 LRRC36Q1X8D7 754 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 MPV17LQ2QL34 196 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 Q499Y3 187 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 YIF1BQ5BJH7 314 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 OXLD1Q5BKU9 147 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 C9orf152Q5JTZ5 239 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 DMKNQ6E0U4 476 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 OR8H3Q8N146 312 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 OR13C5Q8NGS8 318 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 GGHQ92820 318 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 LEAP2Q969E1 77 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 ZNF184Q99676 751 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 CKLFQ9UBR5 152 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 MOB4Q9Y3A3 225 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 TSSC4Q9Y5U2 329 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 HSPE1-MOB4S4R3N1 261 aa14.01□□□□□ -0.17
PDLIM2-208ENST00000416159 PRKDCP78527 4128 aaKnown RBP14□□□□□ -0.17
PDLIM2-208ENST00000416159 A0A1W2PRX2 142 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 TMEM30CPA0ZSE6 113 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 GEMIN2O14893 280 aaKnown RBP14□□□□□ -0.17
PDLIM2-208ENST00000416159 LALBAP00709 142 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 SNRNP70P08621 437 aaKnown RBP14□□□□□ -0.17
PDLIM2-208ENST00000416159 GTF2F2P13984 249 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 SSTR5P35346 364 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 ADARB1P78563 741 aaKnown RBP14□□□□□ -0.17
PDLIM2-208ENST00000416159 WFDC9Q8NEX5 89 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 ORAI1Q96D31 301 aa14□□□□□ -0.17
PDLIM2-208ENST00000416159 TRAV39A0A0B4J263 110 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 A0A1W2PPI3 338 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 SH2D7A6NKC9 451 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 PF4V1P10720 104 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 CD33P20138 364 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 GNG10P50151 68 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 TAS2R43P59537 309 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 RPS11P62280 158 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 ST3GAL4Q11206 333 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 SLC22A6Q4U2R8 563 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 TCTEX1D4Q5JR98 221 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms