RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 LCTP09848 1927 aa11.33□□□□□ -0.6
SCN1B-202ENST00000415950 TMEM30CPA0ZSE6 113 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 SNRPCP09234 159 aaKnown RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 CCR5P51681 352 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 CCL7P80098 99 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 GAS1P54826 345 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 DLK1P80370 383 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 VWA1Q6PCB0 445 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 Q6ZN92 141 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 RPS4Y2Q8TD47 263 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 MRGPRDQ8TDS7 321 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 PECRQ9BY49 303 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 PROCRQ9UNN8 238 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 FUT9Q9Y231 359 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 K7EQS6 105 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 ZNF25P17030 456 aaPredicted RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 POM121L2Q96KW2 1035 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 OR2M5A3KFT3 312 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 PRR32B1ATL7 298 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 CRISP2P16562 243 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 GALNSP34059 522 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 GNG4P50150 75 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 SRSF3P84103 164 aaKnown RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 DHRS11Q6UWP2 260 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 ELOVL1Q9BW60 279 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 ALX4Q9H161 411 aaPredicted RBP11.32□□□□□ -0.6
SCN1B-202ENST00000415950 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 KIAA1456Q9P272 454 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
SCN1B-202ENST00000415950 KLF4O43474 513 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 RBP4P02753 201 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 G6PCP35575 357 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 Q1RN00 199 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 ANKRD55Q3KP44 614 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 NEIL1Q96FI4 390 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 LPAR5Q9H1C0 372 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 PAM16Q9Y3D7 125 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 H3BQ15 152 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 S100A4P26447 101 aaKnown RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 DSCR4P56555 118 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 IL13RA2Q14627 380 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 PRSS3P2Q8NHM4 247 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 KCNE4Q8WWG9 221 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 PRSS50Q9UI38 385 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 YTHDF2Q9Y5A9 579 aaKnown RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 DNAH12Q6ZR08 3092 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 CXorf51AA0A1B0GTR3 108 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 M0R143 59 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 OPRK1P41145 380 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-202ENST00000415950 SCN4AP35499 1836 aa11.31□□□□□ -0.6
SCN1B-202ENST00000415950 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 NKX2-6A6NCS4 301 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
SCN1B-202ENST00000415950 FBP1P09467 338 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SCAND1P57086 179 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 FUT7Q11130 342 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SARAFQ96BY9 339 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 TECTBQ96PL2 329 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 CCL28Q9NRJ3 127 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 SHISA7A6NL88 538 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 A8MXK9 166 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-202ENST00000415950 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
SCN1B-202ENST00000415950 RPS23P62266 143 aaKnown RBP11.3□□□□□ -0.6
SCN1B-202ENST00000415950 HIST3H3Q16695 136 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
SCN1B-202ENST00000415950 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
SCN1B-202ENST00000415950 LINC00587B1AMM8 73 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms