RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 AESQ08117 197 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CLEC18BQ6UXF7 455 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF554Q86TJ5 538 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 GLCCI1Q86VQ1 547 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 LURAP1Q96LR2 239 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CCL13Q99616 98 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 SHARPINQ9H0F6 387 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 C20orf85Q9H1P6 137 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 RALYQ9UKM9 306 aaKnown RBP11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 PCDHB10Q9UN67 800 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CACNA1DQ01668 2161 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 IGKV1D-8A0A087WSZ0 117 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 ARPC1BO15143 372 aaKnown RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 NDUFB3O43676 98 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 DIRAS3O95661 229 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 CLDN1O95832 211 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 RLN1P04808 185 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 EFNA4P52798 201 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 TMEM33P57088 247 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 DHRS11Q6UWP2 260 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 GIMAP1Q8WWP7 306 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 UPRTQ96BW1 309 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 GPN1Q9HCN4 374 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 MBNL3Q9NUK0 354 aaKnown RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 KIF25Q9UIL4 384 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 MAB21L2Q9Y586 359 aa11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 RAI1Q7Z5J4 1906 aaPredicted RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 ANKHD1Q8IWZ3 2542 aaKnown RBP11.91□□□□□ -0.5
HMGA1P1-201ENST00000415560 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 KALRNO60229 2985 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 A1L4Q6 167 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 PEX14O75381 377 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 SCTP09683 121 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 CDKN1AP38936 164 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 EDDM3BP56851 147 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 LRRC10Q5BKY1 277 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 LPCAT3Q6P1A2 487 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZFAND1Q8TCF1 268 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 DCAF16Q9NXF7 216 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
HMGA1P1-201ENST00000415560 DSCAMO60469 2012 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 BET1O15155 118 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 SPINT2O43291 252 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 ADAM20O43506 726 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 TFF1P04155 84 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 NDUFB7P17568 137 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 IL2RGP31785 369 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 FCGR2CP31995 323 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 GLIPR1P48060 266 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 BCAP31P51572 246 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 P2RX3P56373 397 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 RAB25P57735 213 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 HERV-K104P61576 105 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 METTL11BQ5VVY1 283 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 GALMQ96C23 342 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 COQ2Q96H96 371 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 CCL19Q99731 98 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 TMEM246Q9BRR3 403 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 ALX4Q9H161 411 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P1-201ENST00000415560 TRGV10A0A0A0MS01 117 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 ODAMA1E959 279 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 FAM172BPA6NC97 362 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 OVOL3O00110 214 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 HSPA12AO43301 675 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 PFDN1O60925 122 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 RP2O75695 350 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 IL5P05113 134 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 PGAM2P15259 253 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 FPR2P25090 351 aa11.88□□□□□ -0.51
HMGA1P1-201ENST00000415560 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms