RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZNF488Q96MN9 340 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 BANF2Q9H503 90 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 TAS2R8Q9NYW2 309 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 VPS13CQ709C8 3753 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 A6NNC1 897 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 CDIPTO14735 213 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 BPNT1O95861 308 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 CD8AP01732 235 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 IGHV1-46P01743 117 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 DAZAP2Q15038 168 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-202ENST00000414700 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 MUC15Q8N387 334 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 CYYR1Q96J86 154 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 WDR13Q9H1Z4 485 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
SHMT2-202ENST00000414700 DSCAMO60469 2012 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 H7C417 338 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 RBBP9O75884 186 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 ZNF573Q86YE8 665 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 C11orf53Q8IXP5 236 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 OR2V2Q96R30 315 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 CXXC4Q9H2H0 198 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 RAI1Q7Z5J4 1906 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-202ENST00000414700 NUDT19A8MXV4 375 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 MPIG6BO95866 241 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 SLC25A4P12235 298 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 FOLR2P14207 255 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 RAB5BP61020 215 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 C4orf46Q504U0 113 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 AQP3Q92482 292 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 CPNE2Q96FN4 548 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-202ENST00000414700 VRK1Q99986 396 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-202ENST00000414700 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
SHMT2-202ENST00000414700 ZNF471Q9BX82 626 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-202ENST00000414700 ALX4Q9H161 411 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-202ENST00000414700 DYSFO75923 2080 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-202ENST00000414700 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
SHMT2-202ENST00000414700 LRP5LA4QPB2 252 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 CDC14BO60729 498 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 CRTAPO75718 401 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-202ENST00000414700 BCL3P20749 454 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 CCL8P80075 99 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 RSU1Q15404 277 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 EFNB3Q15768 340 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 MOGAT2Q3SYC2 334 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 LIN54Q6MZP7 749 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 ASCL4Q6XD76 172 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
SHMT2-202ENST00000414700 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 ITLN1Q8WWA0 313 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 S100A13Q99584 98 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 ZNF581Q9P0T4 197 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 IL36RNQ9UBH0 155 aa13.11□□□□□ -0.31
SHMT2-202ENST00000414700 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 CTAG2O75638 210 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 HTR3BO95264 441 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 SOD3P08294 240 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 MPZP25189 248 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 S100PP25815 95 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 COL8A1P27658 744 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 SCAND1P57086 179 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
SHMT2-202ENST00000414700 RAB12Q6IQ22 244 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 MEGF10Q96KG7 1140 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 NOP16Q9Y3C1 178 aaKnown RBP13.1□□□□□ -0.31
SHMT2-202ENST00000414700 A0A0A6YYD4 124 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 A6NLC8 198 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 TMEM210A6NLX4 147 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 B9A039 149 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 J3QT63 122 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 FGF16O43320 207 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 AKAIN1P0CW23 69 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 CD200P41217 278 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 NPBWR1P48145 328 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 ARL11Q969Q4 196 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 TINAGL1Q9GZM7 467 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-202ENST00000414700 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 LPAR5Q9H1C0 372 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 NIT2Q9NQR4 276 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
SHMT2-202ENST00000414700 ZDHHC8Q9ULC8 765 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms