RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KCTD21Q4G0X4 260 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 DYRK2Q92630 601 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 CREB3L1Q96BA8 519 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 COQ2Q96H96 371 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 URM1Q9BTM9 101 aaKnown RBP11.99□□□□□ -0.49
CHD1-202ENST00000414220 BANF2Q9H503 90 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 ABCB10Q9NRK6 738 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
CHD1-202ENST00000414220 KBTBD11-OT1A0A1B0GTJ5 212 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 TRDV1A0A1B0GX56 115 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 A0A1W2PP11 408 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 MPIG6BO95866 241 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 ARSBP15848 533 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 FUT3P21217 361 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 FAM189A2Q15884 450 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 AANATQ16613 207 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 MINOS1Q5TGZ0 78 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 RAB12Q6IQ22 244 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 OR10A7Q8NGE5 316 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 NDNFQ8TB73 568 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
CHD1-202ENST00000414220 NEDD4LQ96PU5 975 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 MEGF9Q9H1U4 602 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 PPIL3Q9H2H8 161 aaKnown RBP11.98□□□□□ -0.49
CHD1-202ENST00000414220 AK6Q9Y3D8 172 aaKnown RBP11.98□□□□□ -0.49
CHD1-202ENST00000414220 PEX16Q9Y5Y5 336 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 MINOS1-NBL1R4GNA1 71 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 V9GY05 133 aa11.98□□□□□ -0.49
CHD1-202ENST00000414220 IGHV2-26A0A0B4J1V2 119 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 TRAV1-2A0A0B4J238 106 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 SLC17A2O00624 439 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 SLC22A1O15245 554 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 TNFAIP8O95379 198 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 GP2P55259 537 aaKnown RBP11.97□□□□□ -0.49
CHD1-202ENST00000414220 RAB11BQ15907 218 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 SSX1Q16384 188 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 LRRC75BQ2VPJ9 315 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 PRAMEF5Q5TYX0 476 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 RSBN1Q5VWQ0 802 aaPredicted RBP11.97□□□□□ -0.49
CHD1-202ENST00000414220 ZNF626Q68DY1 528 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 OR2W3Q7Z3T1 314 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 C3orf56Q8N813 242 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 FAM46BQ96A09 425 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 Q96M66 194 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 SSX3Q99909 188 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 CHIAQ9BZP6 476 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 RAB18Q9NP72 206 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 ETAA1Q9NY74 926 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 CALYQ9NYX4 217 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 RCC2Q9P258 522 aaKnown RBP11.97□□□□□ -0.49
CHD1-202ENST00000414220 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 TRAPPC2LQ9UL33 140 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 SSR3Q9UNL2 185 aa11.97□□□□□ -0.49
CHD1-202ENST00000414220 A0A1B0GUS0 222 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 AIPO00170 330 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 NFYBP25208 207 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 HTR1DP28221 377 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 CEACAM3P40198 252 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 COMPP49747 757 aaPredicted RBP11.96□□□□□ -0.49
CHD1-202ENST00000414220 C6orf183Q5T699 404 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 CD200R1LQ6Q8B3 271 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 SLC16A12Q6ZSM3 486 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 TMEM104Q8NE00 496 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 OR13A1Q8NGR1 328 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 OR4F5Q8NH21 305 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 MRGPRDQ8TDS7 321 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 IDI2-AS1Q9NZ38 188 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 STUB1Q9UNE7 303 aa11.96□□□□□ -0.49
CHD1-202ENST00000414220 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.5
CHD1-202ENST00000414220 A0A087WXM4 84 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 ODF3BA8MYP8 253 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 LEUTXA8MZ59 168 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 PDCD6O75340 191 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 IL1AP01583 271 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 VSIG8P0DPA2 414 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 CD37P11049 281 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 RAB3BP20337 219 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 OMGP23515 440 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 RPS27AP62979 156 aaKnown RBP11.95□□□□□ -0.5
CHD1-202ENST00000414220 SSX2Q16385 188 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 NKAPLQ5M9Q1 402 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
CHD1-202ENST00000414220 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 BEX1Q9HBH7 125 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
CHD1-202ENST00000414220 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
CHD1-202ENST00000414220 A0A087X0M5 115 aa11.94□□□□□ -0.5
CHD1-202ENST00000414220 A0A1B0GX30 115 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms