RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 STX12Q86Y82 276 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 NAXEQ8NCW5 288 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 SPSB4Q96A44 273 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 RCC1LQ96I51 464 aaKnown RBP15.15■□□□□ 0.02
SDCBP-202ENST00000413219 SRXN1Q9BYN0 137 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 OR2H1Q9GZK4 316 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 SLC22A20A6NK97 555 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 CLDN34H7C241 214 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 IFNA5P01569 189 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 CCL3P10147 92 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 SRFP11831 508 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 RAC3P60763 192 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 ACSF3Q4G176 576 aaPredicted RBP15.15■□□□□ 0.02
SDCBP-202ENST00000413219 FAM90A2PQ658T7 463 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 OR2T2Q6IF00 324 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 CDPF1Q6NVV7 123 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 CALHM1Q8IU99 346 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 WNT5BQ9H1J7 359 aa15.15■□□□□ 0.02
SDCBP-202ENST00000413219 SPAG17Q6Q759 2223 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 SHANK1Q9Y566 2161 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 KIR2DS1A0A191URI9 304 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 CYB5R3P00387 301 aaPredicted RBP15.14■□□□□ 0.01
SDCBP-202ENST00000413219 KIR2DS4P43632 304 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 KIR2DS1Q14954 304 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 CDCP2Q5VXM1 449 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 SLC25A26Q70HW3 274 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 SAXO1Q8IYX7 474 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 DNASE2BQ8WZ79 361 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 WDR54Q9H977 334 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 SH2D2AQ9NP31 389 aa15.14■□□□□ 0.01
SDCBP-202ENST00000413219 TRBV24-1A0A075B6N3 115 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 A0A1B0GU03 582 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 IFNA10P01566 189 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 KLK3P07288 261 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-202ENST00000413219 TRGC1P0CF51 173 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 ABHD5Q8WTS1 349 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 RAB40CQ96S21 281 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 UFSP2Q9NUQ7 469 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 TAAR3PQ9P1P4 343 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 RNF150Q9ULK6 438 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 BCL2P10415 239 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 B4GALT1P15291 398 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 RIPPLY2Q5TAB7 128 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 DBX2Q6ZNG2 339 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 OR2V1Q8NHB1 315 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 MBD3L1Q8WWY6 194 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 FRZBQ92765 325 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 P2RX4Q99571 388 aa15.13■□□□□ 0.01
SDCBP-202ENST00000413219 IGKV1D-13A0A0B4J2D9 117 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 IGHV5-10-1A0A0J9YXX1 117 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 CBR3O75828 277 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 IGKV1-13P0DP09 117 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 PKIAP61925 76 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 THNSL2Q86YJ6 484 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 C14orf144Q96I85 54 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 FOXB1Q99853 325 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 CTDSP1Q9GZU7 261 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 GNG13Q9P2W3 67 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 IGHV1-45A0A0A0MS14 117 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 OPN1MWP04001 364 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 WNT2P09544 360 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 SCTP09683 121 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 PATE4P0C8F1 98 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 OPN1MW2P0DN77 364 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 OPN1MW3P0DN78 364 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 S100GP29377 79 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 SSR4P51571 173 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 FGF12P61328 243 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 RAB11AP62491 216 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 HERPUD1Q15011 391 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 MPV17LQ2QL34 196 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 GFI1BQ5VTD9 330 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 AAED1Q7RTV5 226 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 P4HA3Q7Z4N8 544 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 NAT6Q93015 286 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 IMMP1LQ96LU5 166 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 PSMG3Q9BT73 122 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-202ENST00000413219 C1QTNF5Q9BXJ0 243 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 PRDM14Q9GZV8 571 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 CCL28Q9NRJ3 127 aa15.12■□□□□ 0.01
SDCBP-202ENST00000413219 MED12Q93074 2177 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 USP34Q70CQ2 3546 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 ZNF716A6NP11 495 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 PHOX2AO14813 284 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 CELA2AP08217 269 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 EDN3P14138 238 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 NTF4P34130 210 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 REC114Q7Z4M0 266 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 S100PBPQ96BU1 408 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 SDF2L1Q9HCN8 221 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 ATP23Q9Y6H3 246 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 RTTNQ86VV8 2226 aa15.11■□□□□ 0.01
SDCBP-202ENST00000413219 A0A1W2PQM1 296 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-202ENST00000413219 F2RP25116 425 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 ZNF787Q6DD87 383 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 SLC25A24Q6NUK1 477 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 OR5R1Q8NH85 324 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms