RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 IFT22Q9H7X7 185 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 CCL28Q9NRJ3 127 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 GLRX2Q9NS18 164 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF407Q9C0G0 2248 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 MED13Q9UHV7 2174 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 TRAV24A0A0B4J272 114 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 AGPAT2O15120 278 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 DEGS1O15121 323 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 CD5P06127 495 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 DANCRP0C864 163 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 VDAC1P21796 283 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 UCP1P25874 307 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 CD82P27701 267 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 RAB5CP51148 216 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 DVL1P1P54792 670 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 OR2C3Q8N628 320 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 WNT2BQ93097 391 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 RTL8AQ9BWD3 113 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 DLL3Q9NYJ7 618 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 LUZP4Q9P127 313 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 DNAJC13O75165 2243 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 PIGBOS1A0A0B4J2F0 54 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 TSPAN15O95858 294 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 TNFSF10P50591 281 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 EWSR1Q01844 656 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF880Q6PDB4 577 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 PCSK4Q6UW60 755 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 C20orf204Q6ZNR8 217 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 C17orf78Q8N4C9 275 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 OR10J5Q8NHC4 309 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 BOD1Q96IK1 185 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 KIRREL1Q96J84 757 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 CLEC18AA5D8T8 446 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 RHBDL1O75783 438 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF44P15621 663 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF14P17017 642 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 CTRB1P17538 263 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 CD80P33681 288 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 UBE2NP61088 152 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 HLA-DRB3P79483 266 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 CTRB2Q6GPI1 263 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 DHRS7BQ6IAN0 325 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 TMPRSS7Q7RTY8 843 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 Q8IYB0 196 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 CLEC18CQ8NCF0 446 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 OR5D13Q8NGL4 314 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ADAT1Q9BUB4 502 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 C11orf1Q9H5F2 150 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 PLEKHF2Q9H8W4 249 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 CDH20Q9HBT6 801 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 OR2W1Q9Y3N9 320 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ARID1AO14497 2285 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ATP6V1G2-DDX39BF2Z307 99 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 H0Y980 276 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ADAM20O43506 726 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 PGLYRP1O75594 196 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 SFTA3P0C7M3 94 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 OR8U9P0C7N5 309 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 MDH2P40926 338 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 ID4P47928 161 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 VAMP2P63027 116 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 OR8U1Q8NH10 309 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 POLDIP2Q9Y2S7 368 aa9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 STRAPQ9Y3F4 350 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 SPINK2P20155 84 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 CAMLGP49069 296 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 PPP1CBP62140 327 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 ZNF266Q14584 549 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 NMSQ5H8A3 153 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 ZNF324BQ6AW86 544 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 SUMF1Q8NBK3 374 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 PARP12Q9H0J9 701 aaKnown RBP9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 TREM2Q9NZC2 230 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 CACFD1Q9UGQ2 172 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 NDRG3Q9UGV2 375 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 SMPD2O60906 423 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 PRH1P02810 166 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 MMP9P14780 707 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 F2RP25116 425 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 ZNF616Q08AN1 781 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 Q6P435 159 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 VASH2Q86V25 355 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 H1FOOQ8IZA3 346 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 HSD17B11Q8NBQ5 300 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 GPHA2Q96T91 129 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 AIFM2Q9BRQ8 373 aa9.77□□□□□ -0.85
TRAFD1-202ENST00000412615 CABLES2Q9BTV7 478 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms