RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 CENPMQ9NSP4 180 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 FAM212BQ9NTI7 297 aaPredicted RBP12.3□□□□□ -0.44
MINDY4-202ENST00000409881 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 INTS1Q8N201 2190 aaKnown RBP12.3□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 MPIG6BO95866 241 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 CAMLGP49069 296 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
MINDY4-202ENST00000409881 FAM3AP98173 230 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 SLC22A24Q8N4F4 322 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 OR5H2Q8NGV7 314 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 BANF2Q9H503 90 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
MINDY4-202ENST00000409881 SCGB1D2O95969 90 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ISG15P05161 165 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 RPS2P15880 293 aaKnown RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 OPRM1P35372 400 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 GUCA1AP43080 201 aaPredicted RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF133P52736 654 aaPredicted RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 AADACL3Q5VUY0 350 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF610Q8N9Z0 462 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 LPAR5Q9H1C0 372 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 A0A1W2PP11 408 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 CGAP01215 116 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 B4GALT1P15291 398 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 HSD11B1P28845 292 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 RBP2P50120 134 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 GFI1BQ5VTD9 330 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
MINDY4-202ENST00000409881 CCDC54Q8NEL0 328 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 SLC26A10Q8NG04 563 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 C11orf40Q8WZ69 217 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 ST6GALNAC5Q9BVH7 336 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
MINDY4-202ENST00000409881 CEACAM18A8MTB9 384 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 PRH1P02810 166 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 DANCRP0C864 163 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 AMY2BP19961 511 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 ARF1P84077 181 aaKnown RBP12.28□□□□□ -0.44
MINDY4-202ENST00000409881 GAMTQ14353 236 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF674Q2M3X9 581 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 FOXB1Q99853 325 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 C19orf12Q9NSK7 152 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 TMEM38BQ9NVV0 291 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 ESPL1Q14674 2120 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 RPL36A-HNRNPH2H7BZ11 118 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 HIST1H1BP16401 226 aaKnown RBP12.28□□□□□ -0.44
MINDY4-202ENST00000409881 ZNF823P16415 610 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 MAS1LP35410 378 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 RAB1AP62820 205 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 PCK2Q16822 640 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 Q6ZT83 130 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 HIST2H3AQ71DI3 136 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 UBAC2Q8NBM4 344 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 POLR1DQ9Y2S0 133 aa12.28□□□□□ -0.44
MINDY4-202ENST00000409881 MYO7BQ6PIF6 2116 aa12.27□□□□□ -0.44
MINDY4-202ENST00000409881 DEDDO75618 318 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 IL18BPO95998 194 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 MSR1P21757 451 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 UCP2P55851 309 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 TMEM50BP56557 158 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 ARFRP1Q13795 201 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 RSU1Q15404 277 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 SURF2Q15527 256 aaPredicted RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 LRRC18Q8N456 261 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 RARRES2Q99969 163 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 NELFAQ9H3P2 528 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 WFDC1Q9HC57 220 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 ZDHHC8Q9ULC8 765 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 A0A096LPE4 126 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 SLC31A2O15432 143 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 SCGNO76038 276 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 IGHV1-2P23083 117 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 PPP1CCP36873 323 aaKnown RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 MRPS34P82930 218 aaKnown RBP12.27□□□□□ -0.45
MINDY4-202ENST00000409881 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 STX12Q86Y82 276 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 MUCL1Q96DR8 90 aa12.27□□□□□ -0.45
MINDY4-202ENST00000409881 GPR61Q9BZJ8 451 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms