RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 A0A1B0GW64 132 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 CYTIPO60759 359 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 F10P00742 488 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 IGKV1-13P0DP09 117 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 ZNF266Q14584 549 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 GAPTQ8N292 157 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 TMEM252Q8N6L7 170 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 Q8NFD4 153 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 IL36RNQ9UBH0 155 aa13.02□□□□□ -0.33
LYSMD4-204ENST00000409796 DOCK10Q96BY6 2186 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 PROB1E7EW31 1015 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 CCNOP22674 350 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 GDF1P27539 372 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 TRA2AQ13595 282 aaKnown RBP eCLIP13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 Q6ZS49 121 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 ODF3L1Q8IXM7 274 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 SPIN2AQ99865 258 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 SPIN2BQ9BPZ2 258 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 GLRX2Q9NS18 164 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 PATE3B3GLJ2 98 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 SLC33A1O00400 549 aaPredicted RBP13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 HSPB6O14558 160 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 TK1P04183 234 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 HOXA5P20719 270 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 RND3P61587 244 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 PRDX4Q13162 271 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 SUMF2Q8NBJ7 301 aa13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A10PA6NDY2 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A18PA6NE21 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A16PA6NEW6 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A20PA6NIJ5 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A8PA6NJQ4 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 SLC22A20A6NK97 555 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A22PA8MWA6 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A12PA8MX19 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A5PA8MXJ8 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 HSD17B6O14756 317 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 NXPH3O95157 252 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 NAPSAO96009 420 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A15PP0C7V4 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A13PP0C7W8 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A14PP0C7W9 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 FAM90A24PP0C7X0 464 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 CCL2P13500 99 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 GPM6AP51674 278 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 VAMP2P63027 116 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 SSX9Q7RTT3 188 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 WDR5BQ86VZ2 330 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 OR5C1Q8NGR4 320 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 CCDC163A0A0D9SF12 145 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 CST7O76096 145 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 TMEM50AO95807 157 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 DYNLT3P51808 116 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 CPNE4Q96A23 557 aaPredicted RBP13□□□□□ -0.33
LYSMD4-204ENST00000409796 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 SLC25A31Q9H0C2 315 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
LYSMD4-204ENST00000409796 A0A096LPE4 126 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 A0A1W2PPZ6 126 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 RBFOX3A6NFN3 312 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 NDUFB7P17568 137 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 EPHA1P21709 976 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 FGF12P61328 243 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 NMSQ5H8A3 153 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 PLPPR1Q8TBJ4 325 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 POM121Q96HA1 1249 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 SIGLEC12Q96PQ1 595 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 PCSK5Q92824 1860 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 FRYLO94915 3013 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 GFRA1P56159 465 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 RPS23P62266 143 aaKnown RBP12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 UNQ6494/PRO21346Q6UXR6 183 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
LYSMD4-204ENST00000409796 TUSC2O75896 110 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 UCP1P25874 307 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 RAB1AP62820 205 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 ID3Q02535 119 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 NEK7Q8TDX7 302 aa12.98□□□□□ -0.33
LYSMD4-204ENST00000409796 HLA-CQ95604 372 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms