RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 Q8IYB0 196 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 C7orf50Q9BRJ6 194 aaKnown RBP9.74□□□□□ -0.85
SNX13-202ENST00000409604 LINC00470Q9BZP3 86 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 ANXA10Q9UJ72 324 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 FOXD3Q9UJU5 478 aaPredicted RBP9.74□□□□□ -0.85
SNX13-202ENST00000409604 GPR37O15354 613 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 ONECUT2O95948 504 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 HLA-DQB1P01920 261 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 APOA2P02652 100 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 GLRXP35754 106 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 RBM11P57052 281 aaKnown RBP9.74□□□□□ -0.85
SNX13-202ENST00000409604 KCNJ8Q15842 424 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 NHLRC1Q6VVB1 395 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
SNX13-202ENST00000409604 LGI3Q8N145 548 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 ADGRG7Q96K78 797 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 PIGMQ9H3S5 423 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 GCM1Q9NP62 436 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 I3L521 148 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 K7EPK0 472 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 KCNAB3O43448 404 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 SSTR5P35346 364 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 HGFACQ04756 655 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 ASAH1Q13510 395 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 NOXA1Q86UR1 476 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 OR13C8Q8NGS7 320 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 NABP1Q96AH0 204 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 BORCS7-ASMTA0A0B4J1R7 106 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 IGKV1-9A0A0C4DH69 117 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 hADV38S2A0JD32 116 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 PRAF2O60831 178 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 IGF2P01344 180 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 OXA1LQ15070 435 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 IZUMO4Q1ZYL8 232 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 STX12Q86Y82 276 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 OR5AP2Q8NGF4 316 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 UPRTQ96BW1 309 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 WBP1Q96G27 269 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 A0A1W2PPH5 198 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 CRYZL1O95825 349 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 SRP14P37108 136 aaKnown RBP9.73□□□□□ -0.85
SNX13-202ENST00000409604 ETV6P41212 452 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 MSMO1Q15800 293 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 RTN4RL2Q86UN3 420 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 SPRY4Q9C004 299 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 AKR1C1Q04828 323 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 CLEC2AQ6UVW9 174 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 RBMS3Q6XE24 437 aaKnown RBP9.73□□□□□ -0.85
SNX13-202ENST00000409604 PRDM14Q9GZV8 571 aa9.73□□□□□ -0.85
SNX13-202ENST00000409604 MRPS18CQ9Y3D5 142 aaKnown RBP9.73□□□□□ -0.85
SNX13-202ENST00000409604 ZNF705EA8MWA4 302 aaPredicted RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 PLA2G10O15496 165 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 LCN2P80188 198 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 GAPTQ8N292 157 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 MUC20Q8N307 709 aaPredicted RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 LRRC20Q8TCA0 184 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 ZNF665Q9H7R5 613 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 RPH3ALQ9UNE2 315 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 IGHV1-69-2A0A0G2JMI3 117 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 NPIPB13A6NJU9 1138 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 NPIPB4C9JG80 1138 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 F8VVB4 439 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 F8VWA3 439 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 ATP6V1G1O75348 118 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 GNB4Q9HAV0 340 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 MTCH1Q9NZJ7 389 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 ZNF581Q9P0T4 197 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 CLCF1Q9UBD9 225 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 IGHV3-21A0A0B4J1V1 117 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 ATG12O94817 140 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 NKX2-1P43699 371 aaPredicted RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 SSTP61278 116 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 OR2W3Q7Z3T1 314 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 CD300LFQ8TDQ1 290 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 RNASE6Q93091 150 aaKnown RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 WDR89Q96FK6 387 aaPredicted RBP9.72□□□□□ -0.85
SNX13-202ENST00000409604 HYLS1Q96M11 299 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 FAM215AQ9Y5M1 114 aa9.72□□□□□ -0.85
SNX13-202ENST00000409604 RAB2AP61019 212 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 CYCSP99999 105 aaKnown RBP9.71□□□□□ -0.85
SNX13-202ENST00000409604 DHRS2Q13268 280 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 ADAD2Q8NCV1 583 aaKnown RBP9.71□□□□□ -0.85
SNX13-202ENST00000409604 REPIN1Q9BWE0 567 aaKnown RBP9.71□□□□□ -0.85
SNX13-202ENST00000409604 SHARPINQ9H0F6 387 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 IFNA7P01567 189 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 HPXP02790 462 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 CRHP06850 196 aa9.71□□□□□ -0.85
SNX13-202ENST00000409604 CTXN2P0C2S0 81 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms