RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CSF1P09603 554 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 NFYBP25208 207 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 HABP2Q14520 560 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 NANOGP1Q8N7R0 232 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 SUMF2Q8NBJ7 301 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 OR9G1Q8NH87 305 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 OR14A2Q96R54 314 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 ZNF581Q9P0T4 197 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 CMYA5Q8N3K9 4069 aa15.74■□□□□ 0.11
TSPAN4-209ENST00000409543 NOTCH1P46531 2555 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 PNMA8CA0A1B0GUJ8 204 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 MAGEA13PA6NCF6 341 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 OOSP1A8MZH6 123 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 NPIPB11E5RHQ5 1161 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 LY6LH3BQJ8 138 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 KCNAB3O43448 404 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 OR7C1O76099 320 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 IL1AP01583 271 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 SERPINA2P20848 420 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 BLCAPP62952 87 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 GPR176Q14439 515 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 MPV17LQ2QL34 196 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 UTF1Q5T230 341 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 TPTE2P1Q5T6R2 138 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 C16orf82Q7Z2V1 217 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 CDH26Q8IXH8 852 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 MRGPRDQ8TDS7 321 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 IDI2-AS1Q9NZ38 188 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 ERGIC3Q9Y282 383 aa15.73■□□□□ 0.11
TSPAN4-209ENST00000409543 A0A1W2PPK0 400 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 GEMIN2O14893 280 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 GTF2F2P13984 249 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 CELP19835 753 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 DEFA6Q01524 100 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 SLC22A6Q4U2R8 563 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 CCDC144NLQ6NUI1 221 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 SLC16A12Q6ZSM3 486 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 C11orf44Q8N8P7 122 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 OR10A7Q8NGE5 316 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 FAM110DQ8TAY7 271 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 AKR1E2Q96JD6 320 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 DERL3Q96Q80 235 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 MMP28Q9H239 520 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 LIN7BQ9HAP6 207 aa15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 NKX1-2Q9UD57 310 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-209ENST00000409543 A0A1W2PP11 408 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 J3QR06 171 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 GZMHP20718 246 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 CD24P25063 80 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 DOC2BQ14184 412 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 RBM39Q14498 530 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 RNLSQ5VYX0 342 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 Q6ZS46 218 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 THRSPQ92748 146 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 MUL1Q969V5 352 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 MRPS24Q96EL2 167 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 MRPS28Q9Y2Q9 187 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 AMMECR1Q9Y4X0 333 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-209ENST00000409543 TMEM30CPA0ZSE6 113 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 PIN1P1O15428 100 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 CDK1P06493 297 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 MNDAP41218 407 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 ATAD3CQ5T2N8 411 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 LYPD6Q86Y78 171 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 JAGN1Q8N5M9 183 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 RFESDQ8TAC1 157 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 WIPF2Q8TF74 440 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 PSG11Q9UQ72 335 aa15.7■□□□□ 0.1
TSPAN4-209ENST00000409543 TRAV39A0A0B4J263 110 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 PEX14O75381 377 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 FBXO24O75426 580 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 MAS1P04201 325 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 MAPK3P27361 379 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 SSTR5P35346 364 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 ARSJQ5FYB0 599 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 C6orf141Q5SZD1 244 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 GLIPR1L1Q6UWM5 242 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 CAPSLQ8WWF8 208 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 LEAP2Q969E1 77 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 MYDGFQ969H8 173 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 RBM14Q96PK6 669 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 MND1Q9BWT6 205 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 SPACA1Q9HBV2 294 aa15.69■□□□□ 0.1
TSPAN4-209ENST00000409543 PTGES3LE9PB15 166 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 OR2F2O95006 317 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 VDAC2P45880 294 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 LTC4SQ16873 150 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 HIST2H2BDQ6DRA6 164 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 NKAIN3Q8N8D7 197 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 TOMM40LQ969M1 308 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 RPEQ96AT9 228 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 OR5M11Q96RB7 305 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 OCSTAMPQ9BR26 566 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 SLC25A33Q9BSK2 321 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 SCN3BQ9NY72 215 aa15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 RCC2Q9P258 522 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-209ENST00000409543 IGHV3-7P01780 117 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 MT-ND4P03905 459 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM106CPP0CH98 169 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms