RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 MRGPRDQ8TDS7 321 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 CCDC32Q9BV29 185 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 FAM234AQ9H0X4 552 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 SPACA1Q9HBV2 294 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 CHMP1AQ9HD42 196 aaPredicted RBP11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 ZNF230Q9UIE0 474 aaPredicted RBP11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 OTOGQ6ZRI0 2925 aa11.65□□□□□ -0.54
CHRNA1-204ENST00000409323 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.55
CHRNA1-204ENST00000409323 A0A0G2JMP0 313 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 A0A0X1KG70 313 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 XRCC3O43542 346 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 UPK1BO75841 260 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 P2RX3P56373 397 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 ARFRP1Q13795 201 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 RBM39Q14498 530 aaKnown RBP11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 ZNF79Q15937 498 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 OR4M2Q8NGB6 313 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 CMSS1Q9BQ75 279 aaKnown RBP11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 SEBOXQ9HB31 216 aaPredicted RBP11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 RPUSD1Q9UJJ7 312 aaKnown RBP11.64□□□□□ -0.55
CHRNA1-204ENST00000409323 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 ODAMA1E959 279 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 MEIOCA2RUB1 952 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 TPPPO94811 219 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 TGFAP01135 160 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 MSMBP08118 114 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 NPY4RP50391 375 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 LTC4SQ16873 150 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 ZNF497Q6ZNH5 498 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 PRR18Q8N4B5 295 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 GDPD1Q8N9F7 314 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 MRPL30Q8TCC3 161 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 NUDT16L1Q9BRJ7 211 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 SRRQ9GZT4 340 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 AUNIPQ9H7T9 357 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 ONECUT1Q9UBC0 465 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 ADAM30Q9UKF2 790 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 TRAPPC2LQ9UL33 140 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 HSF4Q9ULV5 492 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 CSPG4Q6UVK1 2322 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 ZANQ9Y493 2812 aa11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHRNA1-204ENST00000409323 TMEM30CPA0ZSE6 113 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 A8MXK9 166 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 B4DSR2 109 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 SSX5O60225 188 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FOXH1O75593 365 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 MT-ND4P03905 459 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 CSN2P05814 226 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 CD3GP09693 182 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 OMGP23515 440 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 TALDO1P37837 337 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 MNDAP41218 407 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 GNG2P59768 71 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 ARF6P62330 175 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 IL18Q14116 193 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 COX4I2Q96KJ9 171 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 HIF1ANQ9NWT6 349 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FAM172BPA6NC97 362 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 SCGNO76038 276 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 SSTR5P35346 364 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 PAX2Q02962 417 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 HACD4Q5VWC8 232 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 SLC35E4Q6ICL7 350 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FAM53AQ6NSI3 398 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 FAM131AQ6UXB0 335 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 BAIAP2L2Q6UXY1 529 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 GVQW1Q8N7I0 195 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 RFESDQ8TAC1 157 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 RABL2AQ9UBK7 228 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
CHRNA1-204ENST00000409323 MMP23AO75900 390 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 IGHV3-7P01780 117 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 MRPS15P82914 257 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 UTF1Q5T230 341 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 FAHD2BQ6P2I3 314 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 ZNF782Q6ZMW2 699 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 LYSMD2Q8IV50 215 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 FAHD2AQ96GK7 314 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 C12orf4Q9NQ89 552 aa11.61□□□□□ -0.55
CHRNA1-204ENST00000409323 IGKV1D-8A0A087WSZ0 117 aa11.6□□□□□ -0.55
CHRNA1-204ENST00000409323 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
CHRNA1-204ENST00000409323 A0A0A6YYH2 397 aa11.6□□□□□ -0.55
CHRNA1-204ENST00000409323 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms