RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SHEQ5VZ18 495 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 LIAT1Q6ZQX7 453 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 MOB1BQ7L9L4 216 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 SLC5A7Q9GZV3 580 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 TLNRD1Q9H1K6 362 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 PIGMQ9H3S5 423 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 OR14J1Q9UGF5 321 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 HEATR1Q9H583 2144 aaKnown RBP20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 MPPED1O15442 326 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 HAND1O96004 215 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 GNRHRP30968 328 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 IL15RAQ13261 267 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 RAB32Q13637 225 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 ZNF497Q6ZNH5 498 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 LGI3Q8N145 548 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 PLPPR1Q8TBJ4 325 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 UFSP2Q9NUQ7 469 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 FBXO9Q9UK97 447 aaPredicted RBP20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 LEUTXA8MZ59 168 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 PHF1O43189 567 aaPredicted RBP20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 LYL1P12980 280 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 S100A10P60903 97 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 LRTM2Q8N967 370 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 OR10J5Q8NHC4 309 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 DUSP13Q9UII6 198 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 KIF25Q9UIL4 384 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 TRAPPC2LQ9UL33 140 aa20.86■□□□□ 0.93
DNMT3A-206ENST00000406659 ACACAQ13085 2346 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 GPR31O00270 319 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 FAM27E3Q08E93 113 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 GLYATL2Q8WU03 294 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 ST8SIA2Q92186 375 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 OR5AC2Q9NZP5 309 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 C3orf85A0A1B0GTC6 90 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 A0A1B0GWJ7 208 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 WNT9BO14905 357 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 KCNAB3O43448 404 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 KCNJ3P48549 501 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 RND3P61587 244 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 ESCO2Q56NI9 601 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 PCSK4Q6UW60 755 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 WDR82Q6UXN9 313 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 ARPC5LQ9BPX5 153 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 CABLES2Q9BTV7 478 aa20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 ZNF471Q9BX82 626 aaPredicted RBP20.85■□□□□ 0.93
DNMT3A-206ENST00000406659 A0A0G2JNJ9 132 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 hCG_1807616A0A1W2PRN6 198 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 ZNF250P15622 560 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 C1QTNF12Q5T7M4 302 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 ACP7Q6ZNF0 438 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 OR2Z1Q8NG97 314 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 MSI2Q96DH6 328 aaKnown RBP20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 C18orf12Q96KH6 178 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 TAAR3PQ9P1P4 343 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 Q9UFV3 132 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 TUBD1Q9UJT1 453 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 AUP1Q9Y679 476 aa20.84■□□□□ 0.93
DNMT3A-206ENST00000406659 IGKV1D-13A0A0B4J2D9 117 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 F5H0A9 414 aaPredicted RBP20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 IGKV1-13P0DP09 117 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 GLRXP35754 106 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 TMPRSS3P57727 454 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 LYZL2Q7Z4W2 148 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 MRGPRGQ86SM5 289 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 TBC1D26Q86UD7 250 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 LRP11Q86VZ4 500 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 LDLRAD3Q86YD5 345 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 KIRREL1Q96J84 757 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 TP53RKQ96S44 253 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 BOD1L1Q8NFC6 3051 aa20.83■□□□□ 0.93
DNMT3A-206ENST00000406659 TRAV39A0A0B4J263 110 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 HSD17B6O14756 317 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 CEBPDP49716 269 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 LUMP51884 338 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 SRPXP78539 464 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 MSMPQ1L6U9 139 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 ZNF818PQ6ZRF7 136 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 COMMD7Q86VX2 200 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 FOXRED2Q8IWF2 684 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 GAPTQ8N292 157 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 OR1S1Q8NH92 325 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 IL1F10Q8WWZ1 152 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 SNRNP40Q96DI7 357 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 RRNAD1Q96FB5 475 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 CNTNAP3BQ96NU0 1288 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 CNTNAP3Q9BZ76 1288 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 OR2W1Q9Y3N9 320 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 IGHV3-13P01766 116 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 RLN2P04090 185 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 KLF3P57682 345 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 SMCO1Q147U7 214 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 H1FOOQ8IZA3 346 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 CCL28Q9NRJ3 127 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 DNAJB11Q9UBS4 358 aa20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 UBE2J1Q9Y385 318 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-206ENST00000406659 DSPP15924 2871 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 FAM87AP0C7U9 286 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 LMO1P25800 156 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 NKX6-1P78426 367 aaPredicted RBP20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 VHLLQ6RSH7 139 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms