RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	NQO2	P16083	231 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CD200	P41217	278 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CLEC9A	Q6UXN8	241 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC24A4	Q8NFF2	622 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ANKRD31	Q8N7Z5	1873 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FBLIM1	Q8WUP2	373 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SCARF2	Q96GP6	870 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ATP5S	Q99766	215 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TOX4	O94842	621 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RAB5A	P20339	215 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	PAX5	Q02548	391 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR4C5	Q8NGB2	326 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	KLK13	Q9UKR3	277 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR2W1	Q9Y3N9	320 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MBP	P02686	304 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ADAD2	Q8NCV1	583 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DYRK2	Q92630	601 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SPAG8	Q99932	426 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR1A1	Q9P1Q5	309 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	POMT1	Q9Y6A1	747 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TRBV5-5	A0A0J9YX44	114 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZNF665	Q9H7R5	613 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SAP30L	Q9HAJ7	183 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	LRRC3C	A6NJW4	275 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	PSG4	Q00888	419 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FHL5	Q5TD97	284 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR4A4P	Q8NGN8	299 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SAP25	Q8TEE9	199 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RPS4Y1	P22090	263 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	IFITM3	Q01628	133 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TNXA	Q16473	311 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MMP24	Q9Y5R2	645 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TRAPPC1	Q9Y5R8	145 aa		11.62	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TRAV39	A0A0B4J263	110 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	GCG	P01275	180 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RNASE1	P07998	156 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HLA-G	P17693	338 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR1L4	Q8NGR5	311 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	KCNK17	Q96T54	332 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	AMELY	Q99218	206 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MCM3AP	O60318	1980 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454		A0A0U1RQV5	110 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CDS2	O95674	445 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	PGA4	P0DJD7	388 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FGF8	P55075	233 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZNF154	Q13106	437 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SH2D2A	Q9NP31	389 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RBM11	P57052	281 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	VWA1	Q6PCB0	445 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	WDR61	Q9GZS3	305 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TREM2	Q9NZC2	230 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	NRXN2	Q9P2S2	1712 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	IGLV1-36	A0A0B4J1U3	117 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HAX1	O00165	279 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	UQCRFS1	P47985	274 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	LOXL4	Q96JB6	756 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	LPAR3	Q9UBY5	353 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TPR	P12270	2363 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TMEM218	A2RU14	115 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ROM1	Q03395	351 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RALY	Q9UKM9	306 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TPPP2	P59282	170 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	LYZL2	Q7Z4W2	148 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TMEM251	Q8N6I4	163 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR8B3	Q8NGG8	313 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR8B2	Q96RD0	313 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DDA1	Q9BW61	102 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC7A10	Q9NS82	523 aa		11.61	□□□□□ -0.55
CACNA1C-222	ENST00000406454		K7ESF4	209 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	GALR1	P47211	349 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	AMT	P48728	403 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MOGAT2	Q3SYC2	334 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CTHRC1	Q96CG8	243 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	THYN1	Q9P016	225 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	GNG4	P50150	75 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR2J1	Q9GZK6	312 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ALX4	Q9H161	411 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DOK5	Q9P104	306 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	VSIG4	Q9Y279	399 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HSBP1	O75506	76 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CTSB	P07858	339 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	USF1	P22415	310 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZNF66	Q6ZN08	573 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZBTB34	Q8NCN2	500 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RNF122	Q9H9V4	155 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	C7orf66	A4D0T2	115 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	NKX2-6	A6NCS4	301 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RBFOX3	A6NFN3	312 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	IGLV3-21	P80748	117 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MSL2	Q9HCI7	577 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC23A3	Q6PIS1	610 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC25A47	Q6Q0C1	308 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HSD17B10	Q99714	261 aa	Known RBP	11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	PILRB	Q9UKJ0	227 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	C16orf97	H3BN30	126 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DNASE2B	Q8WZ79	361 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RNF2	Q99496	336 aa		11.6	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MS4A5	Q9H3V2	200 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms