RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR2H2O95918 312 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 PPYP01298 95 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 IGHG3P01860 377 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 C1QBP02746 253 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 HLA-DRB3P79483 266 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 DHODHQ02127 395 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 ST3GAL2Q16842 350 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 ZNF626Q68DY1 528 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 DOLPP1Q86YN1 238 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 ADGRG7Q96K78 797 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 C2orf50Q96LR7 162 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 REPIN1Q9BWE0 567 aaKnown RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 PKIBQ9C010 78 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 ZDHHC8Q9ULC8 765 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 A0A1W2PPV4 95 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 OOEPA6NGQ2 149 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 ZG16O60844 167 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 TPPPO94811 219 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 MT-CO2P00403 227 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 IFNA1P01562 189 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 ZNF154Q13106 437 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 C1QL2Q7Z5L3 287 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 SLA2Q9H6Q3 261 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 IL19Q9UHD0 177 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 TP53BP1Q12888 1972 aaPredicted RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 OR5AC1P0C628 307 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 TIMP3P35625 211 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 BAXQ07812 192 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 KLF9Q13886 244 aaPredicted RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 TMEM255AQ5JRV8 349 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 STARD4Q96DR4 205 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 ARPC5LQ9BPX5 153 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 ZNF251Q9BRH9 671 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 GON7Q9BXV9 100 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 TMEM165Q9HC07 324 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 SLC25A10Q9UBX3 287 aaPredicted RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 DOCK10Q96BY6 2186 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 CYB5R3P00387 301 aaPredicted RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 FCGR3AP08637 254 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 MPV17P39210 176 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 MRPS11P82912 194 aaKnown RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 ZNF260Q3ZCT1 412 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 OR4D10Q8NGI6 311 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 NABP1Q96AH0 204 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 NAA60Q9H7X0 242 aa7.8□□□□□ -1.16
LIG4-202ENST00000405925 ELF5Q9UKW6 265 aaPredicted RBP7.8□□□□□ -1.16
LIG4-202ENST00000405925 J3QRE1 110 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 MGST3O14880 152 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 GPR37O15354 613 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 ICMTO60725 284 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 OR2F2O95006 317 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 IL18BPO95998 194 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 RAB7AP51149 207 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 RAG2P55895 527 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 UBA52P62987 128 aaKnown RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 CALHM1Q8IU99 346 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 SPICQ8N5J4 248 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 DUSP18Q8NEJ0 188 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 RNASE6Q93091 150 aaKnown RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 TSNAXQ99598 290 aaKnown RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 GCM1Q9NP62 436 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 PRR13Q9NZ81 148 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 CLCF1Q9UBD9 225 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 SSUH2Q9Y2M2 353 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 CHD8Q9HCK8 2581 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 C9orf170A2RU37 121 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 SFT2D2O95562 160 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 OR8U8P0C7N1 319 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 ZNF266Q14584 549 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 STUMQ69YW2 141 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 BTNL3Q6UXE8 466 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 LINC00596Q86U02 117 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 HOGA1Q86XE5 327 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 HPSE2Q8WWQ2 592 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 RBMXL1Q96E39 390 aaKnown RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 PBDC1Q9BVG4 233 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 HRH4Q9H3N8 390 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 TMEM14DPA8MWL7 114 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 WNT9BO14905 357 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 ADAP1O75689 374 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 CST4P01036 141 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 APOC3P02656 99 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 PPP1CCP36873 323 aaKnown RBP7.79□□□□□ -1.16
LIG4-202ENST00000405925 LPAR6P43657 344 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 FHL1Q13642 323 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 SLC51BQ86UW2 128 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 OR5P3Q8WZ94 311 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 CHD7Q9P2D1 2997 aa7.79□□□□□ -1.16
LIG4-202ENST00000405925 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 A8MXE2 369 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 ETV2O00321 342 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 RHBDL1O75783 438 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 RCC1P18754 421 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 GZMKP49863 264 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 GAPTQ8N292 157 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 FAM213BQ8TBF2 198 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms