RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 JOSD1Q15040 202 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-205ENST00000404914 P2RY6Q15077 328 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 USF2Q15853 346 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-205ENST00000404914 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 ZNF468Q5VIY5 522 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-205ENST00000404914 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-205ENST00000404914 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 CABLES2Q9BTV7 478 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 TAAR3PQ9P1P4 343 aa13.35□□□□□ -0.27
ATG4B-205ENST00000404914 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 SHBQ15464 509 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 ZNF774Q6NX45 483 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 MYPOPQ86VE0 399 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-205ENST00000404914 CALHM1Q8IU99 346 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 BORCS8Q96FH0 119 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 ZNF442Q9H7R0 627 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 SDF2L1Q9HCN8 221 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 WASF3Q9UPY6 502 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 TMEM56-RWDD3S4R434 201 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 CYB5R3P00387 301 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-205ENST00000404914 TAS2R30P59541 319 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 ID3Q02535 119 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 EXT1Q16394 746 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 OR5R1Q8NH85 324 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 RBMXL1Q96E39 390 aaKnown RBP13.34□□□□□ -0.27
ATG4B-205ENST00000404914 NEU1Q99519 415 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 SCTP09683 121 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 GZMHP20718 246 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 TLE4Q04727 773 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 FAM180AQ6UWF9 173 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 OR5L2Q8NGL0 311 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 GNPNAT1Q96EK6 184 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-205ENST00000404914 RNF115Q9Y4L5 304 aa13.34□□□□□ -0.27
ATG4B-205ENST00000404914 DHHO43323 396 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-205ENST00000404914 BCL2P10415 239 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 CEACAM1P13688 526 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 GUCA1AP43080 201 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-205ENST00000404914 CLN3Q13286 438 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 HERPUD1Q15011 391 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 TMEM183AQ8IXX5 376 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
ATG4B-205ENST00000404914 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 ATP5SQ99766 215 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 CCL28Q9NRJ3 127 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 GAB2Q9UQC2 676 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 PDCD6O75340 191 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 BTF3P20290 206 aaKnown RBP13.33□□□□□ -0.28
ATG4B-205ENST00000404914 CRYGSP22914 178 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 SPCS3P61009 180 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 HNF4GQ14541 408 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 C10orf128Q5T292 105 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 BEND4Q6ZU67 534 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 TMEM54Q969K7 222 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 WFIKKN1Q96NZ8 548 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 PITPNC1Q9UKF7 332 aa13.33□□□□□ -0.28
ATG4B-205ENST00000404914 ADAMTS20P59510 1910 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 TRBV24-1A0A075B6N3 115 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ZNF705GA8MUZ8 300 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-205ENST00000404914 HSPB6O14558 160 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 TCAPO15273 167 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-205ENST00000404914 LCATP04180 440 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 SPINK2P20155 84 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ZNF787Q6DD87 383 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ABLIM2Q6H8Q1 611 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ASCL4Q6XD76 172 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ELOVL1Q9BW60 279 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 TLX3O43711 291 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-205ENST00000404914 NTF4P34130 210 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 ERVS71-1P61550 626 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 H3F3AP84243 136 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 STX12Q86Y82 276 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 SNIP1Q8TAD8 396 aaKnown RBP13.32□□□□□ -0.28
ATG4B-205ENST00000404914 LRFN1Q9P244 771 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 IL36RNQ9UBH0 155 aa13.32□□□□□ -0.28
ATG4B-205ENST00000404914 B4DEV8 164 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 G3V3Y1 287 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 NRASP01111 189 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 TUBG1P23258 451 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
ATG4B-205ENST00000404914 OR14J1Q9UGF5 321 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 A0A1W2PR77 199 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 CYTIPO60759 359 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 OR4A8P0C604 315 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
ATG4B-205ENST00000404914 MRPS34P82930 218 aaKnown RBP13.31□□□□□ -0.28
ATG4B-205ENST00000404914 ZXDAP98168 799 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 MALLQ13021 153 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 RTP5Q14D33 572 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 UBALD2Q8IYN6 164 aa13.31□□□□□ -0.28
ATG4B-205ENST00000404914 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms