RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C1orf50Q9BV19 199 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 SUCNR1Q9BXA5 334 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 POTEKPQ9BYX7 375 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 SLC25A31Q9H0C2 315 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 NSRP1Q9H0G5 558 aaKnown RBP2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 RHOFQ9HBH0 211 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 PLEKHJ1Q9NW61 149 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 ZNF492Q9P255 531 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 TAC3Q9UHF0 121 aa2.03□□□□□ -2.08
HMGB1P17-201ENST00000403495 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 TRAV8-2A0A0B4J237 113 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 C9JQL5 133 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 KCNK2O95069 426 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 HLA-AP01891 365 aaKnown RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC2A1P11166 492 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 SPNP16150 400 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 HIST1H1CP16403 213 aaKnown RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 TGFBR2P37173 567 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 COILP38432 576 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 LDLRAD2Q5SZI1 272 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 DRAM2Q6UX65 266 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 DGAT2L6Q6ZPD8 337 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 PAGE2Q7Z2X7 111 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 ADM2Q7Z4H4 148 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC13A5Q86YT5 568 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 BLIDQ8IZY5 108 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 TMEM251Q8N6I4 163 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 GATD1Q8NB37 220 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 TWIST2Q8WVJ9 160 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 CMTM5Q96DZ9 223 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 PAIP2Q9BPZ3 127 aaKnown RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 METTL17Q9H7H0 456 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 SPANXB1Q9NS25 103 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 BTRCQ9Y297 605 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 KIAA1671Q9BY89 1806 aa2.02□□□□□ -2.09
HMGB1P17-201ENST00000403495 TRIP11Q15643 1979 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 TICRRQ7Z2Z1 1910 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGKV1OR2-108A0A075B7D4 117 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 PGPA6NDG6 321 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR6C70A6NIJ9 312 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 F5H5K5 113 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 GPR171O14626 319 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 PHYHO14832 338 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 CYTH3O43739 400 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 SOD3P08294 240 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 SNRPAP09012 282 aaKnown RBP2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 COX5BP10606 129 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 PSKH1P11801 424 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 ATF1P18846 271 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 GRPRP30550 384 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 RCVRNP35243 200 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 CLDN12P56749 244 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 DYNLL1P63167 89 aaKnown RBP2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 BAMBIQ13145 260 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 TBC1D28Q2M2D7 210 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC36A2Q495M3 483 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 DNAL1Q4LDG9 190 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 COQ5Q5HYK3 327 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 NXNL2Q5VZ03 156 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 TMEM156Q8N614 296 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 OTUB2Q96DC9 234 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 RBP7Q96R05 134 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 TSSK6Q9BXA6 273 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 UGT2B28Q9BY64 529 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 UCK1Q9HA47 277 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 HMGXB4Q9UGU5 601 aa2.01□□□□□ -2.09
HMGB1P17-201ENST00000403495 TRAV8-3A0A0A6YYJ7 113 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 DAPL1A0PJW8 107 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 FAM183AA6NL82 134 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 CD300LBA8K4G0 201 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 CCRL2O00421 344 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZW10O43264 779 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 PDCD6O75340 191 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 SOX14O95416 240 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 FSTL3O95633 263 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGHG2P01859 326 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 APOEP02649 317 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 CECR9P0C854 216 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 UGT2B7P16662 529 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 AKR1C4P17516 323 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 PRTN3P24158 256 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 CBX5P45973 191 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 KLF3P57682 345 aaPredicted RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 MAGOHP61326 146 aaKnown RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC9A3R2Q15599 337 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 PDZD11Q5EBL8 140 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 FAM162BQ5T6X4 162 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZNF660Q6AZW8 331 aaPredicted RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ELP2Q6IA86 826 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 DCXRQ7Z4W1 244 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 DPPA2Q7Z7J5 298 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZFP82Q8N141 532 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 C2orf73Q8N5S3 287 aaPredicted RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR8J2Q8NGG1 315 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 CASTOR1Q8WTX7 329 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 MAL2Q969L2 176 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ITFG2Q969R8 447 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 SMIM19Q96E16 107 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms