RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 FAM89BQ8N5H3 189 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 ABHD3Q8WU67 409 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
ATG3-202ENST00000402314 IGSF23A1L1A6 192 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 NKX2-6A6NCS4 301 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 CEACAM18A8MTB9 384 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 NTN3O00634 580 aaPredicted RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 ST8SIA3O43173 380 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 CLDN15P56746 228 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 CARD18P57730 90 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 B3GALT5-AS1P59052 145 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 ZFP36L1Q07352 338 aaKnown RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 OR5C1Q8NGR4 320 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 SH2D2AQ9NP31 389 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 V9GYS6 101 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 MED13Q9UHV7 2174 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 CBR3O75828 277 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 TCN2P20062 427 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 SRYQ05066 204 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 TIPARPQ7Z3E1 657 aaKnown RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 ZNF664Q8N3J9 261 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 SLC35G3Q8N808 338 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 GAB2Q9UQC2 676 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 TECTAO75443 2155 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 CTSSP25774 331 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 OTX1P32242 354 aaPredicted RBP12.16□□□□□ -0.46
ATG3-202ENST00000402314 GNMTQ14749 295 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 PPA1Q15181 289 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 PIGYQ3MUY2 71 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 SPINK14Q6IE38 97 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 PPP1R32Q7Z5V6 425 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 OR5T1Q8NG75 326 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
ATG3-202ENST00000402314 A0A0U1RQV5 110 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 ICAM4Q14773 271 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 CEACAM16Q2WEN9 425 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 HIKESHIQ53FT3 197 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 M1APQ8TC57 530 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 SLC2A9Q9NRM0 540 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 HMGB3O15347 200 aaKnown RBP12.15□□□□□ -0.46
ATG3-202ENST00000402314 P04436 131 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 CCL2P13500 99 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 ZNF154Q13106 437 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 TMEM187Q14656 261 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 PRSS8Q16651 343 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 SLC22A25Q6T423 547 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 AAED1Q7RTV5 226 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 GGNQ86UU5 652 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 SPTSSAQ969W0 71 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 HES7Q9BYE0 225 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 SLC25A31Q9H0C2 315 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 PLA2G3Q9NZ20 509 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 ANXA10Q9UJ72 324 aa12.15□□□□□ -0.46
ATG3-202ENST00000402314 TTC28Q96AY4 2481 aa12.15□□□□□ -0.47
ATG3-202ENST00000402314 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 LAMTOR5O43504 91 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 VAMP5O95183 116 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 CNOT4O95628 575 aaKnown RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 FAM27BQ5VT28 67 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 SLC25A24Q6NUK1 477 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 NUDT16L1Q9BRJ7 211 aaKnown RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 NAA60Q9H7X0 242 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 LRRC3CA6NJW4 275 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 CTSDP07339 412 aaPredicted RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 DYNLT3P51808 116 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 HIST1H3AP68431 136 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 PSG4Q00888 419 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 OR2C3Q8N628 320 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
ATG3-202ENST00000402314 OR14J1Q9UGF5 321 aa12.14□□□□□ -0.47
ATG3-202ENST00000402314 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 SYNGR3O43761 229 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 IFNA10P01566 189 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 CELA3AP09093 270 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 CCNOP22674 350 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 CRYGSP22914 178 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
ATG3-202ENST00000402314 UCP2P55851 309 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 RAC3P60763 192 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
ATG3-202ENST00000402314 ZNF92Q03936 586 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 OR1F12Q8NHA8 337 aa12.13□□□□□ -0.47
ATG3-202ENST00000402314 PP6455Q8WZ26 134 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms