RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ETAA1Q9NY74 926 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 A0A075B6Q4 140 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 ODAMA1E959 279 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 H3BUI4 141 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 HIST1H1DP16402 221 aaKnown RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 CCL3L1P16619 93 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 MEIKINA0A087WXM9 373 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 MFNGO00587 321 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
HMGA1-204ENST00000401473 APOA1P02647 267 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 LIPFP07098 398 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 CGB3P0DN86 165 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 CGB7P0DN87 165 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 DLX1P56177 255 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-204ENST00000401473 ZNF260Q3ZCT1 412 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 CDNFQ49AH0 187 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 MZT2AQ6P582 158 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 Q8N7P7 452 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 OR13A1Q8NGR1 328 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 OR4K15Q8NH41 348 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 S100A16Q96FQ6 103 aaKnown RBP13.11□□□□□ -0.31
HMGA1-204ENST00000401473 CMTM3Q96MX0 182 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 TMPRSS13Q9BYE2 586 aa13.11□□□□□ -0.31
HMGA1-204ENST00000401473 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 RGS5O15539 181 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 PTHLHP12272 177 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
HMGA1-204ENST00000401473 DLX6P56179 175 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 C5orf24Q7Z6I8 188 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 MCFD2Q8NI22 146 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 CORO2AQ92828 525 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
HMGA1-204ENST00000401473 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 A0A0G2JMP0 313 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 A0A0X1KG70 313 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 hADV38S2A0JD32 116 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 XRCC3O43542 346 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 NAPSAO96009 420 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 MMP9P14780 707 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 BTNL3Q6UXE8 466 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 OR4M2Q8NGB6 313 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
HMGA1-204ENST00000401473 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 C7orf69Q9H7B7 122 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.1□□□□□ -0.31
HMGA1-204ENST00000401473 DIABLOQ9NR28 239 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
HMGA1-204ENST00000401473 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 FUOMA2VDF0 154 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 CA11O75493 328 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 GATA3P23771 443 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
HMGA1-204ENST00000401473 MADCAM1Q13477 382 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 ZNF565Q8N9K5 539 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 MRGPRDQ8TDS7 321 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 ONECUT1Q9UBC0 465 aa13.09□□□□□ -0.31
HMGA1-204ENST00000401473 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 A6NJ64 397 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 MMP23AO75900 390 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 SCGNO76038 276 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 HLA-DQB1P01920 261 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF728P0DKX0 622 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 C17orf58Q2M2W7 97 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 LURAP1LQ8IV03 231 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 WDFY2Q96P53 400 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 SIRPDQ9H106 197 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 MBNL3Q9NUK0 354 aaKnown RBP13.08□□□□□ -0.32
HMGA1-204ENST00000401473 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 TRGV10A0A0A0MS01 117 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 SERPINE3A8MV23 424 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 OMGP23515 440 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 HACD4Q5VWC8 232 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 ZNF714Q96N38 554 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 CMSS1Q9BQ75 279 aaKnown RBP13.08□□□□□ -0.32
HMGA1-204ENST00000401473 MMP27Q9H306 513 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 TRAPPC2LQ9UL33 140 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 UBE2J1Q9Y385 318 aaPredicted RBP13.08□□□□□ -0.32
HMGA1-204ENST00000401473 AUP1Q9Y679 476 aa13.08□□□□□ -0.32
HMGA1-204ENST00000401473 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms