RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 RPL34P49207 117 aaKnown RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 CEBPEQ15744 281 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 UBE2L6O14933 153 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 ZIC3O60481 467 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 COL8A1P27658 744 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 IGHV3-23P01764 117 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 KCNJ3P48549 501 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 TAS2R60P59551 318 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 SMRP1Q8NCR6 262 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 POLR2AP24928 1970 aaKnown RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 SLC25A53Q5H9E4 307 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 PTP4A1Q93096 173 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 KCNE1BA0A087WTH5 132 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 CLDN14O95500 239 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 CYB5R3P00387 301 aaPredicted RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 C10orf113Q5VZT2 155 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 RHBDD2Q6NTF9 364 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 GLI3P10071 1580 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 ALX3O95076 343 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 SLC25A1P53007 311 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 TMED3Q9Y3Q3 217 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 P01737 135 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 DCAF10Q5QP82 559 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 Q8WTZ3 238 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 OR2H1Q9GZK4 316 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 TOLLIPQ9H0E2 274 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 OR2T8A6NH00 312 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 HSPB2A8KAH6 182 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 CIDEAO60543 219 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 RPS4Y1P22090 263 aaKnown RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 HSPB2Q16082 182 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 ZBTB37Q5TC79 503 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
VAPA-202ENST00000400000 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
VAPA-202ENST00000400000 RAC3P60763 192 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ZNF826PQ6ZT77 177 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ZNF561Q8N587 486 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 PTX4Q96A99 478 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ADAMTSL1Q8N6G6 1762 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 HELTA6NFD8 242 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
VAPA-202ENST00000400000 TMEM33P57088 247 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 GAB4Q2WGN9 574 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 UQCC2Q9BRT2 126 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ADAM11O75078 769 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 PRR35P0CG20 571 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
VAPA-202ENST00000400000 SPANXN1Q5VSR9 72 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 LDLRAD3Q86YD5 345 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 C11orf94C9JXX5 98 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 H3BTX0 84 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 DLL1O00548 723 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 S100A8P05109 93 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 GPR6P46095 362 aaPredicted RBP12.05□□□□□ -0.48
VAPA-202ENST00000400000 PRB3Q04118 309 aaPredicted RBP12.05□□□□□ -0.48
VAPA-202ENST00000400000 SSX1Q16384 188 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 OR1L1Q8NH94 360 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ALS2Q96Q42 1657 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 IGHV3-66A0A0C4DH42 116 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 ARRDC5A6NEK1 342 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 M0R3E3 92 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 FXYD1O00168 92 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 SRSF10O75494 262 aaKnown RBP12.05□□□□□ -0.48
VAPA-202ENST00000400000 C1QCP02747 245 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 MMP26Q9NRE1 261 aa12.05□□□□□ -0.48
VAPA-202ENST00000400000 MESP2Q0VG99 397 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 FGF11Q92914 225 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 NPAS1Q99742 590 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 A0A1W2PRX2 142 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 NDUFB6O95139 128 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 NUBP1P53384 320 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
VAPA-202ENST00000400000 TBX15Q96SF7 602 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms