RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CLRN3Q8NCR9 226 aa10.02□□□□□ -0.81
ITSN1-211ENST00000399355 ARL11Q969Q4 196 aa10.02□□□□□ -0.81
ITSN1-211ENST00000399355 VSIRQ9H7M9 311 aa10.02□□□□□ -0.81
ITSN1-211ENST00000399355 SLC7A11Q9UPY5 501 aa10.02□□□□□ -0.81
ITSN1-211ENST00000399355 PUS1Q9Y606 427 aaKnown RBP eCLIP10.02□□□□□ -0.81
ITSN1-211ENST00000399355 TAS2R31P59538 309 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 HERV-K104P61576 105 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ABLIM2Q6H8Q1 611 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ZNF343Q6P1L6 599 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ODF3L1Q8IXM7 274 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 AQP10Q96PS8 301 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 NSG2Q9Y328 171 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ARHGAP32A7KAX9 2087 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 HCFC1P51610 2035 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 TRBV6-7A0A0A0MS04 114 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 TMEM127O75204 238 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 CST2P09228 141 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 ARG2P78540 354 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 PPA1Q15181 289 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 FIP1L1Q6UN15 594 aaKnown RBP10.01□□□□□ -0.81
ITSN1-211ENST00000399355 BTNL3Q6UXE8 466 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 WDR5BQ86VZ2 330 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 PIGMQ9H3S5 423 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 MLXQ9UH92 298 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 TINAGQ9UJW2 476 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 A0A1W2PPH5 198 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 CYTIPO60759 359 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 SERPINA7P05543 415 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 PSG2P11465 335 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 HFEQ30201 348 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 OR10Z1Q8NGY1 313 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 MMP24Q9Y5R2 645 aa10.01□□□□□ -0.81
ITSN1-211ENST00000399355 A0A087WZY1 265 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 SLC22A20A6NK97 555 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 CD300LBA8K4G0 201 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 CD59P13987 128 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 ERVFRD-1P60508 538 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FOXF2Q12947 444 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 SPRNQ5BIV9 151 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 INTS12Q96CB8 462 aaKnown RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 RCC2Q9P258 522 aaKnown RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 TRAV24A0A0B4J272 114 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FAM201AQ5SY85 155 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FAHD2BQ6P2I3 314 aaPredicted RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 OR5C1Q8NGR4 320 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FAHD2AQ96GK7 314 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 BCO1Q9HAY6 547 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 MEMO1Q9Y316 297 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 IFNA21P01568 189 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 CD55P08174 381 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FUT3P21217 361 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 CNN3Q15417 329 aaKnown RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 FOXL2NBQ6ZUU3 175 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 FAM24BQ8N5W8 94 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 SUMF2Q8NBJ7 301 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 APH1AQ96BI3 265 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
ITSN1-211ENST00000399355 RBM7Q9Y580 266 aaKnown RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 COL27A1Q8IZC6 1860 aaPredicted RBP10□□□□□ -0.81
ITSN1-211ENST00000399355 CEACAM18A8MTB9 384 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 CTSDP07339 412 aaPredicted RBP9.99□□□□□ -0.81
ITSN1-211ENST00000399355 MPZP25189 248 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 FABP6P51161 128 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 SSPNQ14714 243 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 MPPED1O15442 326 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 CAMLGP49069 296 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 GNMTQ14749 295 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 OR8B8Q15620 311 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 LIAT1Q6ZQX7 453 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 Q6ZR03 302 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 ZDHHC23Q8IYP9 409 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 SPSB1Q96BD6 273 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 ZNF286AQ9HBT8 521 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 TMEM100Q9NV29 134 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 DSCAMO60469 2012 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 CHST1O43916 411 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 RAMP3O60896 148 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 TPPPO94811 219 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 TBPP20226 339 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
ITSN1-211ENST00000399355 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 PRAMEF6Q5VXH4 476 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 TMEM42Q69YG0 159 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 SLC16A13Q7RTY0 426 aa9.99□□□□□ -0.81
ITSN1-211ENST00000399355 CPNE4Q96A23 557 aaPredicted RBP9.99□□□□□ -0.81
ITSN1-211ENST00000399355 CTRB1P17538 263 aa9.98□□□□□ -0.81
ITSN1-211ENST00000399355 FUT6P51993 359 aa9.98□□□□□ -0.81
ITSN1-211ENST00000399355 AWAT1Q58HT5 328 aa9.98□□□□□ -0.81
ITSN1-211ENST00000399355 CTRB2Q6GPI1 263 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms