RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GAPTQ8N292 157 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 UBALD1Q8TB05 177 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 ZNF721Q8TF20 911 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 EID2BQ96D98 161 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 CDK5RAP2Q96SN8 1893 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 CDX4O14627 284 aaPredicted RBP7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 APCSP02743 223 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 ISG15P05161 165 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TMEM92Q6UXU6 159 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 FAM24BQ8N5W8 94 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 OR11H7Q8NGC8 314 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TMEM37Q8WXS4 190 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 WNK3Q9BYP7 1800 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 CITO14578 2027 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 SIAH2O43255 324 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 CIDEAO60543 219 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 HOXB1P14653 301 aaPredicted RBP7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 METAP1P53582 386 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 IZUMO4Q1ZYL8 232 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TEPPQ6URK8 271 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TRMT61AQ96FX7 289 aaKnown RBP7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 LINC00052Q96N35 136 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TUBGCP6Q96RT7 1819 aa7.34□□□□□ -1.23
SPTLC3-201ENST00000399002 TRBV5-5A0A0J9YX44 114 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 CORTO00230 105 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 CD160O95971 181 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 RPLP1P05386 114 aaKnown RBP7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 RBM11P57052 281 aaKnown RBP7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 INSL4Q14641 139 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 TEX30Q5JUR7 227 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 ABLIM2Q6H8Q1 611 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 TMEM116Q8NCL8 245 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 ADAMTS17Q8TE56 1095 aa7.34□□□□□ -1.24
SPTLC3-201ENST00000399002 DHRS7CA6NNS2 312 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 CHST1O43916 411 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 MT-ND6P03923 174 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 PRSS41Q7RTY9 318 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 CXorf67Q86X51 503 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 BLNKQ8WV28 456 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 P2RX4Q99571 388 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 LRRC37AA6NMS7 1700 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 PLXNB2O15031 1838 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 DEFB108AA8MXU0 73 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 PPOXP50336 477 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 OR5AU1Q8NGC0 362 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 OR4D11Q8NGI4 311 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 FLYWCH2Q96CP2 140 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 ELF5Q9UKW6 265 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 LIPGQ9Y5X9 500 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 MFSD2BA6NFX1 497 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 FAM90A26D6RGX4 464 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 TCAPO15273 167 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 COMPP49747 757 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 LSM11P83369 360 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 TRIP6Q15654 476 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 RBPMS2Q6ZRY4 209 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 OR1L8Q8NGR8 309 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 IL22RA2Q969J5 263 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 NTMQ9P121 344 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 SYNGR1O43759 233 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 PRKNO60260 465 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 ASAH2BP0C7U1 165 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 CD226Q15762 336 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 ZNF645Q8N7E2 425 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 GVQW1Q8N7I0 195 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 CA5BP1Q8WTZ4 195 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 LTBP4Q8N2S1 1624 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 SOCS1O15524 211 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 C5orf17Q8NAS9 161 aa7.33□□□□□ -1.24
SPTLC3-201ENST00000399002 DXOO77932 396 aaKnown RBP7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 HBZP02008 142 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 MARS2Q96GW9 593 aaKnown RBP7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 HIGD1AQ9Y241 93 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 ATAD5Q96QE3 1844 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 UBR3Q6ZT12 1888 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 HELTA6NFD8 242 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 RPL7P18124 248 aaKnown RBP7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 ERVS71-1P61550 626 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 PSG5Q15238 335 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 C9orf50Q5SZB4 431 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 CALHM1Q8IU99 346 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 DDA1Q9BW61 102 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 GHITMQ9H3K2 345 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 MIOXQ9UGB7 285 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 KLK13Q9UKR3 277 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 VSIG4Q9Y279 399 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 ZFP30Q9Y2G7 519 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 IGHV5-10-1A0A0J9YXX1 117 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 F2RL2O00254 374 aa7.32□□□□□ -1.24
SPTLC3-201ENST00000399002 KLK10O43240 276 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms