RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DHRS2Q13268 280 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 NSUN5P2Q63ZY6 315 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 PRSS3P2Q8NHM4 247 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 TET1Q8NFU7 2136 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 ALX3O95076 343 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 ATP5J2P56134 94 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OOEPA6NGQ2 149 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR5AL1P0C617 328 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 CD40P25942 277 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 OR10A7Q8NGE5 316 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 G6PCP35575 357 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 P2RX4Q99571 388 aa12.47□□□□□ -0.41
PCDHA11-201ENST00000398640 DYRK2Q92630 601 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 COL25A1Q9BXS0 654 aaPredicted RBP12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 OR2H1Q9GZK4 316 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 CISD1Q9NZ45 108 aaKnown RBP12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 MRM2Q9UI43 246 aaKnown RBP12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 TO15178 435 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 PMELP40967 661 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 OR4A4PQ8NGN8 299 aa12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.41
PCDHA11-201ENST00000398640 CD59P13987 128 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 GALP22466 123 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 DYNLT3P51808 116 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 FBXW9Q5XUX1 488 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 ASCL3Q9NQ33 180 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 TRDCB7Z8K6 153 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 POLR2GP62487 172 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 HIST1H3AP68431 136 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 SSX1Q16384 188 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 MAP6Q96JE9 813 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 HS3ST3B1Q9Y662 390 aa12.46□□□□□ -0.42
PCDHA11-201ENST00000398640 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PPIAL4FP0DN26 164 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PSG6Q00889 435 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PDPNQ86YL7 162 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 SH2D2AQ9NP31 389 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PILRAQ9UKJ1 303 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PPIAL4AQ9Y536 164 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 IGHV3OR16-12A0A075B7B8 117 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 CST4P01036 141 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 COX6A1P12074 109 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 NQO2P16083 231 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 FGF9P31371 208 aaPredicted RBP12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 MMDQ15546 238 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 XAF1Q6GPH4 301 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 DEGS2Q6QHC5 323 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF66Q6ZN08 573 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 SOCS1O15524 211 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 TGOLN2O43493 480 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 MVDP53602 400 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 LY6EQ16553 131 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 CSN3P07498 182 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 LOXL3P58215 753 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 DUSP18Q8NEJ0 188 aa12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF646O15015 1829 aaPredicted RBP12.45□□□□□ -0.42
PCDHA11-201ENST00000398640 PIGYQ3MUY2 71 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF770Q6IQ21 691 aaPredicted RBP12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 PARP11Q9NR21 331 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 KLK13Q9UKR3 277 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 SMPD2O60906 423 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 MGPP08493 103 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ACAA2P42765 397 aaKnown RBP12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM97Q5BJF2 176 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 INO80CQ6PI98 192 aaPredicted RBP12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 FDCSPQ8NFU4 85 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 SSMEM1Q8WWF3 244 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 PRDM14Q9GZV8 571 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 STARD10Q9Y365 291 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 PTPRFP10586 1907 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 CST2P09228 141 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms