RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 FFAR4Q5NUL3 377 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 FGF11Q92914 225 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 RPEQ96AT9 228 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 MSL2Q9HCI7 577 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 IL36GQ9NZH8 169 aa12.38□□□□□ -0.43
PCDHGA11-201ENST00000398587 AHRRA9YTQ3 701 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 TGIF1Q15583 401 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 MAP1LC3B2A6NCE7 125 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 FGF12P61328 243 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 DYRK2Q92630 601 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 MAP1LC3BQ9GZQ8 125 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 SLC35B3Q9H1N7 401 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 VWA8A3KMH1 1905 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 CHST1O43916 411 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 ACP1P24666 158 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 UBE2G2P60604 165 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
PCDHGA11-201ENST00000398587 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM96BQ9Y3D0 163 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 HOXD4P09016 255 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 DBX2Q6ZNG2 339 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 RAB1CQ92928 201 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 SAP30LQ9HAJ7 183 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 TUBG2Q9NRH3 451 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 IGLV3-12A0A075B6K2 115 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 C20orf202A1L168 122 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF345Q14585 488 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 SSX8Q7RTT4 187 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 SHISA3A0PJX4 238 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 NECAP1Q8NC96 275 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
PCDHGA11-201ENST00000398587 TRAV39A0A0B4J263 110 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 DUXBA0A1W2PPF3 345 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A10PA6NDY2 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A18PA6NE21 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A16PA6NEW6 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A20PA6NIJ5 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A8PA6NJQ4 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A7PA6NKC0 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A12PA8MX19 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A5PA8MXJ8 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A23PA8MXZ1 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 TMPRSS2O15393 492 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A15PP0C7V4 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A13PP0C7W8 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A14PP0C7W9 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 FAM90A24PP0C7X0 464 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 COX5BP10606 129 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 CD200P41217 278 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 AKR1C3P42330 323 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 PRRX1P54821 245 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 UCP2P55851 309 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 H3F3AP84243 136 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 MS4A5Q9H3V2 200 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 SLC35D1Q9NTN3 355 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 GPR132Q9UNW8 380 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 AQP3Q92482 292 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 AKIRIN1Q9H9L7 192 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 TNFSF18Q9UNG2 199 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF439Q8NDP4 499 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 VSTM2AQ8TAG5 236 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF488Q96MN9 340 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
PCDHGA11-201ENST00000398587 DYNLT3P51808 116 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
PCDHGA11-201ENST00000398587 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms