RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KIR3DL3Q8N743 410 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 OR5H6Q8NGV6 325 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 DYRK2Q92630 601 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 BCL7BQ9BQE9 202 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 SIRPDQ9H106 197 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 ZNF69Q9UC07 566 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 CEPT1Q9Y6K0 416 aa20.86■□□□□ 0.93
U2AF1-203ENST00000398137 hADV38S2A0JD32 116 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 ODAMA1E959 279 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 UBE2QL1A1L167 161 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 TMEM89A2RUT3 159 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 H3BUI4 141 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 COMPP49747 757 aaPredicted RBP20.85■□□□□ 0.93
U2AF1-203ENST00000398137 MEF2CQ06413 473 aaPredicted RBP20.85■□□□□ 0.93
U2AF1-203ENST00000398137 C6orf201Q7Z4U5 140 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 TRAPPC6BQ86SZ2 158 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 CMTM4Q8IZR5 234 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 OR56B1Q8NGI3 324 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 WDFY2Q96P53 400 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 PCGF1Q9BSM1 259 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 KPTNQ9Y664 436 aa20.85■□□□□ 0.93
U2AF1-203ENST00000398137 H3BMQ9 156 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 HAX1O00165 279 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 TOX4O94842 621 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 MMP9P14780 707 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 BLMHQ13867 455 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 RBM39Q14498 530 aaKnown RBP20.84■□□□□ 0.93
U2AF1-203ENST00000398137 PTX4Q96A99 478 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 DMRTB1Q96MA1 342 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 ZNF48Q96MX3 618 aaPredicted RBP20.84■□□□□ 0.93
U2AF1-203ENST00000398137 SULT4A1Q9BR01 284 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 ETAA1Q9NY74 926 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 NUP50Q9UKX7 468 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 ETV7Q9Y603 341 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 SOX21Q9Y651 276 aaPredicted RBP20.84■□□□□ 0.93
U2AF1-203ENST00000398137 LINC00312Q9Y6C7 94 aa20.84■□□□□ 0.93
U2AF1-203ENST00000398137 MEIKINA0A087WXM9 373 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 TRGV10A0A0A0MS01 117 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 A0A1W2PPH5 198 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 TMEM30CPA0ZSE6 113 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 CCDC160A6NGH7 325 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 FOXI3A8MTJ6 420 aaPredicted RBP20.83■□□□□ 0.93
U2AF1-203ENST00000398137 TRIM77I1YAP6 450 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 GLP1RP43220 463 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 SCAND1P57086 179 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 PAX5Q02548 391 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 MOGAT2Q3SYC2 334 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 C12orf54Q6X4T0 127 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 Q8N7P7 452 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 SIGLECL1Q8N7X8 197 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 SLC25A38Q96DW6 304 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 TBX15Q96SF7 602 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 ATG5Q9H1Y0 275 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 ABRACLQ9P1F3 81 aa20.83■□□□□ 0.93
U2AF1-203ENST00000398137 M0R1W7 72 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 TMEM127O75204 238 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 GLAP06280 429 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 ZNF728P0DKX0 622 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 IGHV4-38-2P0DP08 117 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 RORCP51449 518 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 DLX1P56177 255 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 DLX6P56179 175 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 UBA52P62987 128 aaKnown RBP20.82■□□□□ 0.92
U2AF1-203ENST00000398137 SLC35E4Q6ICL7 350 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 ZNF497Q6ZNH5 498 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 VMO1Q7Z5L0 202 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 UPRTQ96BW1 309 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 JMJD8Q96S16 334 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 FAAP24Q9BTP7 215 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 RBM38Q9H0Z9 239 aaKnown RBP20.82■□□□□ 0.92
U2AF1-203ENST00000398137 SIRT7Q9NRC8 400 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 PLEKHJ1Q9NW61 149 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 RHBDL2Q9NX52 303 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 DSCAML1Q8TD84 2053 aa20.82■□□□□ 0.92
U2AF1-203ENST00000398137 TRAV39A0A0B4J263 110 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 METTL21EPA6NDL7 271 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 FPR2P25090 351 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 TMEM50BP56557 158 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 ACTG1P63261 375 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 PRB3Q04118 309 aaPredicted RBP20.81■□□□□ 0.92
U2AF1-203ENST00000398137 FAM189A2Q15884 450 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 OR13A1Q8NGR1 328 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 ARHGAP5-AS1Q96IT6 56 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 ZNF714Q96N38 554 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 OR6C3Q9NZP0 311 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 SPATA2Q9UM82 520 aa20.81■□□□□ 0.92
U2AF1-203ENST00000398137 IGHV3OR16-10A0A075B7F0 116 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 TRAV40A0A0B4J280 105 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 RAB27BO00194 218 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 PLAC9Q5JTB6 97 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 OR10R2Q8NGX6 335 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 KCTD12Q96CX2 325 aaKnown RBP20.8■□□□□ 0.92
U2AF1-203ENST00000398137 RAB3CQ96E17 227 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 PECRQ9BY49 303 aa20.8■□□□□ 0.92
U2AF1-203ENST00000398137 UBE2J1Q9Y385 318 aaPredicted RBP20.8■□□□□ 0.92
U2AF1-203ENST00000398137 ERVFRD-1P60508 538 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 Q6ZTK2 550 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 MRGPRDQ8TDS7 321 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 CCDC107Q8WV48 283 aa20.79■□□□□ 0.92
U2AF1-203ENST00000398137 CORO2AQ92828 525 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms