RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 PSG11Q9UQ72 335 aa14.31□□□□□ -0.12
CTDSP2-201ENST00000398073 CHRNA7P36544 502 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 SUMO1P63165 101 aaKnown RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 SCGB2A2Q13296 93 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 Q3ZCU0 254 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 CXorf67Q86X51 503 aaPredicted RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 WDR54Q9H977 334 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 RCC2Q9P258 522 aaKnown RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 TPRP12270 2363 aaKnown RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 PTPRZ1P23471 2315 aaPredicted RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 FCGR3BO75015 233 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 DPPA3Q6W0C5 159 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 OR5A2Q8NGI9 324 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 POM121L2Q96KW2 1035 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 BOD1Q96IK1 185 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 TMEM74BQ9NUR3 256 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 TNFSF15O95150 251 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 IGKV3-11P04433 115 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 PMS2P11Q13670 270 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 IGSF11Q5DX21 431 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 ARSJQ5FYB0 599 aaPredicted RBP14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 KLHDC1Q8N7A1 406 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 SMRP1Q8NCR6 262 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 GPR87Q9BY21 358 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 WDR81Q562E7 1941 aa14.3□□□□□ -0.12
CTDSP2-201ENST00000398073 TRGV10A0A0A0MS01 117 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 FOXL2P58012 376 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 KRTDAPP60985 99 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 HIST1H3AP68431 136 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 TMEM252Q8N6L7 170 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 OR4A4PQ8NGN8 299 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 ZMAT5Q9UDW3 170 aaKnown RBP14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 LOC105371267A0A1B0GV96 52 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 CRYM-AS1A6NIL9 109 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 ZNF891A8MT65 544 aaPredicted RBP14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 CA11O75493 328 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 TOMM20LQ6UXN7 152 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 AARDQ4LEZ3 155 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 SNX22Q96L94 193 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 MS4A10Q96PG2 267 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 IGHV5-10-1A0A0J9YXX1 117 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 J3QT63 122 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 PTBP3O95758 552 aaKnown RBP14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 UBE2V2Q15819 145 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 C2orf68Q2NKX9 166 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 C9orf152Q5JTZ5 239 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 OR10X1Q8NGY0 326 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 PACRGQ96M98 296 aaPredicted RBP14.29□□□□□ -0.12
CTDSP2-201ENST00000398073 A0A0J9YW62 118 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 DVL1O14640 695 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 HRASP01112 189 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 MMP9P14780 707 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 FOSL1P15407 271 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 CNN1P51911 297 aaKnown RBP14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 ERVS71-1P61550 626 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 ZNF658BQ4V348 819 aaPredicted RBP14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 H1FOOQ8IZA3 346 aaPredicted RBP14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 MRGPRFQ96AM1 343 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 ANAPC16Q96DE5 110 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 USB1Q9BQ65 265 aaKnown RBP14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 VAMP8Q9BV40 100 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 C1QL1O75973 258 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 DEFA4P12838 97 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 WNT2BQ93097 391 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 TPPP3Q9BW30 176 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 ADH4P08319 380 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 FAM78BQ5VT40 261 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 ABHD3Q8WU67 409 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 HSF4Q9ULV5 492 aa14.28□□□□□ -0.12
CTDSP2-201ENST00000398073 M0R1B8 84 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 HSBP1O75506 76 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 MEOX1P50221 254 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 CHEK1O14757 476 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 SOX15O60248 233 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 CD81P60033 236 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 RHOBP62745 196 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 EIF3IQ13347 325 aaKnown RBP14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 LINC00596Q86U02 117 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 PITPNC1Q9UKF7 332 aa14.27□□□□□ -0.12
CTDSP2-201ENST00000398073 LYPD3O95274 346 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 ZXDAP98168 799 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 ARTNQ5T4W7 220 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 SMIM15Q7Z3B0 74 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 LRRC75AQ8NAA5 344 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 OR2I1PQ8NGU4 316 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 ABHD14BQ96IU4 210 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 SLC45A2Q9UMX9 530 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 A0A087X0M5 115 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 A0A1B0GX30 115 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 MELTFP08582 738 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 EIF4E3Q8N5X7 224 aaKnown RBP14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 POC1AQ8NBT0 407 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 MRGPRDQ8TDS7 321 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 TCFL5Q9UL49 500 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 KCNMB2Q9Y691 235 aa14.27□□□□□ -0.13
CTDSP2-201ENST00000398073 DEFB108AA8MXU0 73 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms